RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 SUPT20HL1Q3ZLR7 823 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
MCF2L-206ENST00000397021 TEPSINQ96N21 525 aa11.85□□□□□ -0.51
MCF2L-206ENST00000397021 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
MCF2L-206ENST00000397021 ARAP2Q8WZ64 1704 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 FOXN1O15353 648 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 SLC10A3P09131 477 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-206ENST00000397021 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
MCF2L-206ENST00000397021 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 WBP1LQ9NX94 342 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
MCF2L-206ENST00000397021 MROH7-TTC4A0A0A0MT08 1334 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 GAKO14976 1311 aa11.84□□□□□ -0.51
MCF2L-206ENST00000397021 PPP1R12BO60237 982 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-206ENST00000397021 USP2O75604 605 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-206ENST00000397021 MAP2K2P36507 400 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 NOGQ13253 232 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 PICALMQ13492 652 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 ZNF512BQ96KM6 892 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-206ENST00000397021 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
MCF2L-206ENST00000397021 IDH1O75874 414 aaKnown RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 GSTO1P78417 241 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 MAP2K1Q02750 393 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 LDLRAD1Q5T700 205 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 MIGA2Q7L4E1 593 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 FAM83AQ86UY5 434 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
MCF2L-206ENST00000397021 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
MCF2L-206ENST00000397021 TRPM7Q96QT4 1865 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 GPR75-ASB3A0A0A6YYF3 556 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 WDHD1O75717 1129 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-206ENST00000397021 LDHCP07864 332 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 IREB2P48200 963 aaKnown RBP11.81□□□□□ -0.52
MCF2L-206ENST00000397021 RGS3P49796 1198 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 FKBP1CQ5VVH2 108 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 ADGRA1Q86SQ6 560 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 FAM151AQ8WW52 585 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
MCF2L-206ENST00000397021 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
MCF2L-206ENST00000397021 PAPPA2Q9BXP8 1791 aa11.81□□□□□ -0.52
MCF2L-206ENST00000397021 POLR2AP24928 1970 aaKnown RBP11.8□□□□□ -0.52
MCF2L-206ENST00000397021 GOLIM4O00461 696 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 CYP7A1P22680 504 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 LBX1P52954 281 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 RHBDL3P58872 404 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-206ENST00000397021 TSHZ3Q63HK5 1081 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 MAGEB6Q8N7X4 407 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-206ENST00000397021 CSRNP1Q96S65 589 aa11.8□□□□□ -0.52
MCF2L-206ENST00000397021 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
MCF2L-206ENST00000397021 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 DYNLL1P63167 89 aaKnown RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 SPRYD7Q5W111 196 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 ZSCAN29Q8IWY8 852 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 ANKRD13AQ8IZ07 590 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 MIGA1Q8NAN2 632 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
MCF2L-206ENST00000397021 IDI2Q9BXS1 227 aa11.79□□□□□ -0.52
MCF2L-206ENST00000397021 DDTLA6NHG4 134 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-206ENST00000397021 ENTPD3O75355 529 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 GJA5P36382 358 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 CTCFP49711 727 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-206ENST00000397021 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 VGLL4Q14135 290 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 SLFNL1Q499Z3 407 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 TEX11Q8IYF3 940 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.78□□□□□ -0.52
MCF2L-206ENST00000397021 OTUD7AQ8TE49 926 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-206ENST00000397021 WNK4Q96J92 1243 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 WRNIP1Q96S55 665 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 RFX7Q2KHR2 1363 aa11.78□□□□□ -0.52
MCF2L-206ENST00000397021 TRPA1O75762 1119 aa11.77□□□□□ -0.53
MCF2L-206ENST00000397021 BAG3O95817 575 aa11.77□□□□□ -0.53
MCF2L-206ENST00000397021 CHGBP05060 677 aa11.77□□□□□ -0.53
MCF2L-206ENST00000397021 ATP5JP18859 108 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms