RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 F6X3S4 739 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 IRF6O14896 467 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 MAP3K7O43318 606 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
NUP98-206ENST00000397013 MTMR14Q8NCE2 650 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 STK31Q9BXU1 1019 aa10.25□□□□□ -0.77
NUP98-206ENST00000397013 ANKRD18BA2A2Z9 1011 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 IL1R1P14778 569 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.77
NUP98-206ENST00000397013 INHBEP58166 350 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 CALD1Q05682 793 aaKnown RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 FLIIQ13045 1269 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 TDRD3Q9H7E2 651 aaKnown RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
NUP98-206ENST00000397013 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
NUP98-206ENST00000397013 TRIM66O15016 1216 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 ZBTB48P10074 688 aaPredicted RBP10.23□□□□□ -0.77
NUP98-206ENST00000397013 GYG1P46976 350 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
NUP98-206ENST00000397013 LMBR1LQ6UX01 489 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 WWC1Q8IX03 1113 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 BRI3BPQ8WY22 251 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 OPTNQ96CV9 577 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 TEPSINQ96N21 525 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 PUS3Q9BZE2 481 aaKnown RBP10.23□□□□□ -0.77
NUP98-206ENST00000397013 ARHGAP39Q9C0H5 1083 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 TMEM39BQ9GZU3 492 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 ZNF70Q9UC06 446 aaPredicted RBP10.23□□□□□ -0.77
NUP98-206ENST00000397013 ZNF646O15015 1829 aaPredicted RBP10.23□□□□□ -0.77
NUP98-206ENST00000397013 SZT2Q5T011 3432 aa10.23□□□□□ -0.77
NUP98-206ENST00000397013 TCP10L2B9ZVM9 353 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 VAMP4O75379 141 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 MMP14P50281 582 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 CACNB3P54284 484 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 SP3Q02447 781 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 SUPT20HL1Q3ZLR7 823 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 C6orf132Q5T0Z8 1188 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
NUP98-206ENST00000397013 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
NUP98-206ENST00000397013 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 LINS1Q8NG48 757 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 ARMC5Q96C12 935 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 ERO1AQ96HE7 468 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
NUP98-206ENST00000397013 PTCH2Q9Y6C5 1203 aa10.22□□□□□ -0.77
NUP98-206ENST00000397013 IREB2P48200 963 aaKnown RBP10.21□□□□□ -0.77
NUP98-206ENST00000397013 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.77
NUP98-206ENST00000397013 IFIT5Q13325 482 aaKnown RBP10.21□□□□□ -0.77
NUP98-206ENST00000397013 BEND3Q5T5X7 828 aa10.21□□□□□ -0.77
NUP98-206ENST00000397013 INTS3Q68E01 1043 aaKnown RBP10.21□□□□□ -0.77
NUP98-206ENST00000397013 ANKRD13AQ8IZ07 590 aa10.21□□□□□ -0.77
NUP98-206ENST00000397013 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.773e-7■□□□□ 10.1
NUP98-206ENST00000397013 TTF2Q9UNY4 1162 aaKnown RBP10.21□□□□□ -0.77
NUP98-206ENST00000397013 PSME4Q14997 1843 aa10.21□□□□□ -0.78
NUP98-206ENST00000397013 EXOSC9Q06265 439 aaKnown RBP10.2□□□□□ -0.78
NUP98-206ENST00000397013 VGLL4Q14135 290 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 LDHAL6AQ6ZMR3 332 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 ZNF804AQ7Z570 1209 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 DZIP1LQ8IYY4 767 aaKnown RBP10.2□□□□□ -0.78
NUP98-206ENST00000397013 TDRD7Q8NHU6 1098 aaKnown RBP10.2□□□□□ -0.78
NUP98-206ENST00000397013 SH3TC2Q8TF17 1288 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 KAZALD1Q96I82 304 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 ZNF333Q96JL9 665 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 FAM84BQ96KN1 310 aaPredicted RBP10.2□□□□□ -0.78
NUP98-206ENST00000397013 MYH16Q9H6N6 1097 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 RBM27Q9P2N5 1060 aaKnown RBP10.2□□□□□ -0.78
NUP98-206ENST00000397013 PPP2R3BQ9Y5P8 575 aa10.2□□□□□ -0.78
NUP98-206ENST00000397013 FAM205AQ6ZU69 1335 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 MYO1BO43795 1136 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 CTGFP29279 349 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 FKBP1AP62942 108 aaKnown RBP10.19□□□□□ -0.78
NUP98-206ENST00000397013 CCL15Q16663 113 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 MFSD14BQ5SR56 506 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 ZKSCAN4Q969J2 545 aaPredicted RBP10.19□□□□□ -0.78
NUP98-206ENST00000397013 CNNM1Q9NRU3 951 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 SPEF2Q9C093 1822 aa10.19□□□□□ -0.78
NUP98-206ENST00000397013 FANCIQ9NVI1 1328 aa10.18□□□□□ -0.78
NUP98-206ENST00000397013 H0YGN5 161 aa10.18□□□□□ -0.78
NUP98-206ENST00000397013 HIBADHP31937 336 aaKnown RBP10.18□□□□□ -0.78
NUP98-206ENST00000397013 CRKP46108 304 aa10.18□□□□□ -0.78
NUP98-206ENST00000397013 CHAF1AQ13111 956 aaPredicted RBP10.18□□□□□ -0.78
NUP98-206ENST00000397013 TAF1CQ15572 869 aaPredicted RBP10.18□□□□□ -0.78
NUP98-206ENST00000397013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.18□□□□□ -0.78
NUP98-206ENST00000397013 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
NUP98-206ENST00000397013 SUCLG2Q96I99 432 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms