RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 BLOC1S2Q6QNY1 142 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 TBC1D10CQ8IV04 446 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 RTKN2Q8IZC4 609 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 MKRN1Q9UHC7 482 aaKnown RBP15.13■□□□□ 0.01
TRIM39-204ENST00000396548 CCDC93Q567U6 631 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 PIM2Q9P1W9 311 aa15.13■□□□□ 0.01
TRIM39-204ENST00000396548 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
TRIM39-204ENST00000396548 SUPT20HQ8NEM7 779 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 ANAPC4Q9UJX5 808 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 ZNF213O14771 459 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 HMGB1P09429 215 aaKnown RBP15.12■□□□□ 0.01
TRIM39-204ENST00000396548 GSTO1P78417 241 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-204ENST00000396548 AATFQ9NY61 560 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRIM39-204ENST00000396548 GPR75-ASB3A0A0A6YYF3 556 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 ECE2O60344 883 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 HAND2P61296 217 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 AOC3Q16853 763 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 SDR42E1Q8WUS8 393 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 VPS33BQ9H267 617 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 DBNDD1Q9H9R9 158 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
TRIM39-204ENST00000396548 ST3GAL1Q11201 340 aa15.11■□□□□ 0.01
TRIM39-204ENST00000396548 DHX32Q7L7V1 743 aaKnown RBP15.11■□□□□ 0.01
TRIM39-204ENST00000396548 LARGE1O95461 756 aa15.11■□□□□ 0.01
TRIM39-204ENST00000396548 DACT2Q5SW24 774 aa15.11■□□□□ 0.01
TRIM39-204ENST00000396548 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
TRIM39-204ENST00000396548 YDJCA8MPS7 323 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 TPCN1Q9ULQ1 816 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 WDR19Q8NEZ3 1342 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 APPP05067 770 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 ANTXR2P58335 489 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 ILDR2Q71H61 639 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 NAPBQ9H115 298 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 FGRP09769 529 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 SOGA3Q5TF21 947 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 STAG1Q8WVM7 1258 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
TRIM39-204ENST00000396548 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
TRIM39-204ENST00000396548 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-204ENST00000396548 RHBDL3P58872 404 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 SH3RF3Q8TEJ3 882 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-204ENST00000396548 NACAP1Q9BZK3 213 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 NEDD4P46934 1319 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 LDHCP07864 332 aa15.09■□□□□ 0.01
TRIM39-204ENST00000396548 DALRD3Q5D0E6 543 aaKnown RBP15.09■□□□□ 0.01
TRIM39-204ENST00000396548 SLKQ9H2G2 1235 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-204ENST00000396548 EVCP57679 992 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 ANKRD1Q15327 319 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 ME3Q16798 604 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 SBK1Q52WX2 424 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 Q6ZUG5 572 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 LARP6Q9BRS8 491 aaKnown RBP15.08■□□□□ 0.01
TRIM39-204ENST00000396548 MRIQ9BWK5 157 aa15.08■□□□□ 0.01
TRIM39-204ENST00000396548 SMIM22K7EJ46 135 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 CTDSPL2Q05D32 466 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
TRIM39-204ENST00000396548 PPARAQ07869 468 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 CERS3Q8IU89 383 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 NCOA7Q8NI08 942 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 ZSCAN31Q96LW9 406 aaPredicted RBP15.08■□□□□ 0
TRIM39-204ENST00000396548 INCENPQ9NQS7 918 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 DAGLAQ9Y4D2 1042 aa15.08■□□□□ 0
TRIM39-204ENST00000396548 BTDP43251 543 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 TDO2P48775 406 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 MYH1P12882 1939 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 USP17L3A6NCW0 530 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 USP17L4A6NCW7 530 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 AKNAD1Q5T1N1 836 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 NOL8Q76FK4 1167 aaKnown RBP15.07■□□□□ 0
TRIM39-204ENST00000396548 USP17L1Q7RTZ2 530 aa15.07■□□□□ 0
TRIM39-204ENST00000396548 SH2B1Q9NRF2 756 aaPredicted RBP15.07■□□□□ 0
TRIM39-204ENST00000396548 PPIP5K2O43314 1243 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 EVX2Q03828 476 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
TRIM39-204ENST00000396548 ROBO3Q96MS0 1386 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 BAG3O95817 575 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 SLF2Q8IX21 1173 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 NLGN2Q8NFZ4 835 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
TRIM39-204ENST00000396548 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 NFKBIEO00221 500 aa15.06■□□□□ 0
TRIM39-204ENST00000396548 CWC22Q9HCG8 908 aaKnown RBP15.06■□□□□ 0
TRIM39-204ENST00000396548 LTBP3Q9NS15 1303 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 LRRC2Q9BYS8 371 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 CHMP5Q9NZZ3 219 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM39-204ENST00000396548 CYP2D7A0A087X1C5 515 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 MCM5P33992 734 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 CHST3Q7LGC8 479 aa15.05■□□□□ -0
TRIM39-204ENST00000396548 TTF2Q9UNY4 1162 aaKnown RBP15.05■□□□□ -0
TRIM39-204ENST00000396548 G3V3G9 751 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms