RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
SNX6-202ENST00000396526 ANKIB1Q9P2G1 1089 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 GUCY1B3Q02153 619 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 SGMS1Q86VZ5 419 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 UBAC1Q9BSL1 405 aa18.84■□□□□ 0.61
SNX6-202ENST00000396526 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
SNX6-202ENST00000396526 PDS5AQ29RF7 1337 aaKnown RBP18.83■□□□□ 0.61
SNX6-202ENST00000396526 CCDC196A0A1B0GTZ2 297 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 MINDY4BA8MYZ0 360 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 CTDSPL2Q05D32 466 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 GNL2Q13823 731 aaKnown RBP18.83■□□□□ 0.61
SNX6-202ENST00000396526 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
SNX6-202ENST00000396526 CYB5R4Q7L1T6 521 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 WASF1Q92558 559 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.61
SNX6-202ENST00000396526 TNMDQ9H2S6 317 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 BTAF1O14981 1849 aa18.83■□□□□ 0.61
SNX6-202ENST00000396526 THSD7AQ9UPZ6 1657 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 ST5P78524 1137 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 APOA5Q6Q788 366 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 BRAPQ7Z569 592 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 ESR2Q92731 530 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 LEMD3Q9Y2U8 911 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 NHSQ6T4R5 1651 aa18.83■□□□□ 0.6
SNX6-202ENST00000396526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 MICU3Q86XE3 530 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 CCDC24Q8N4L8 307 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 FBXO18Q8NFZ0 1043 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 PRKAB2O43741 272 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 IARSP41252 1262 aaKnown RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 NFIXQ14938 502 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 WTAPQ15007 396 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 CCDC73Q6ZRK6 1079 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 HPS5Q9UPZ3 1129 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 PCP11498 1178 aaKnown RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 CEBPZQ03701 1054 aaKnown RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 PPARAQ07869 468 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 GRAPQ13588 217 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 GRAPLQ8TC17 118 aaPredicted RBP18.82■□□□□ 0.6
SNX6-202ENST00000396526 RCOR1Q9UKL0 485 aa18.82■□□□□ 0.6
SNX6-202ENST00000396526 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 NEDD4P46934 1319 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 IGDCC4Q8TDY8 1250 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
SNX6-202ENST00000396526 DACT1Q9NYF0 836 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 RAB11FIP4Q86YS3 637 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 TFCP2L1Q9NZI6 479 aa18.81■□□□□ 0.6
SNX6-202ENST00000396526 SCN7AQ01118 1682 aa18.8■□□□□ 0.6
SNX6-202ENST00000396526 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
SNX6-202ENST00000396526 FDPSP14324 419 aaKnown RBP18.8■□□□□ 0.6
SNX6-202ENST00000396526 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
SNX6-202ENST00000396526 HS1BP3Q53T59 392 aa18.8■□□□□ 0.6
SNX6-202ENST00000396526 ALG1Q9BT22 464 aa18.8■□□□□ 0.6
SNX6-202ENST00000396526 ESPNB1AK53 854 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 ME1P48163 572 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 KRT27Q7Z3Y8 459 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 DZIP1Q86YF9 867 aaKnown RBP18.79■□□□□ 0.6
SNX6-202ENST00000396526 WDR66Q8TBY9 1149 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 NOL10Q9BSC4 688 aaKnown RBP18.79■□□□□ 0.6
SNX6-202ENST00000396526 ADD1P35611 737 aaKnown RBP18.79■□□□□ 0.6
SNX6-202ENST00000396526 SSRP1Q08945 709 aaKnown RBP18.79■□□□□ 0.6
SNX6-202ENST00000396526 PPP2R5BQ15173 497 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 STK38Q15208 465 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 LY9Q9HBG7 655 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 CTAGE5O15320 804 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 IQCA1Q86XH1 822 aa18.79■□□□□ 0.6
SNX6-202ENST00000396526 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
SNX6-202ENST00000396526 LIG1P18858 919 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 SAFBQ15424 915 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNX6-202ENST00000396526 SASS6Q6UVJ0 657 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 ZNF804AQ7Z570 1209 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 XDHP47989 1333 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 RCAN1P53805 252 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
SNX6-202ENST00000396526 KCNG4Q8TDN1 519 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
SNX6-202ENST00000396526 USP28Q96RU2 1077 aa18.78■□□□□ 0.6
SNX6-202ENST00000396526 TM4SF1P30408 202 aa18.77■□□□□ 0.6
SNX6-202ENST00000396526 RTN1Q16799 776 aa18.77■□□□□ 0.6
SNX6-202ENST00000396526 KINO60870 393 aaKnown RBP18.77■□□□□ 0.6
SNX6-202ENST00000396526 GSTO1P78417 241 aa18.77■□□□□ 0.6
SNX6-202ENST00000396526 AKAP17AQ02040 695 aaKnown RBP18.77■□□□□ 0.6
SNX6-202ENST00000396526 AMOTL1Q8IY63 956 aa18.77■□□□□ 0.6
SNX6-202ENST00000396526 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
SNX6-202ENST00000396526 ZBTB22O15209 634 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 STK11IPQ8N1F8 1099 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 NSUN4Q96CB9 384 aaKnown RBP18.76■□□□□ 0.59
SNX6-202ENST00000396526 CLSTN2Q9H4D0 955 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 ATP8A2Q9NTI2 1148 aa18.76■□□□□ 0.59
SNX6-202ENST00000396526 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms