RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 SBF1O95248 1867 aa18.06■□□□□ 0.48
PTPN20-206ENST00000395722 BAG3O95817 575 aa18.05■□□□□ 0.48
PTPN20-206ENST00000395722 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
PTPN20-206ENST00000395722 ARHGAP27Q6ZUM4 889 aa18.05■□□□□ 0.48
PTPN20-206ENST00000395722 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
PTPN20-206ENST00000395722 FZD9O00144 591 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 CYP21A2P08686 494 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
PTPN20-206ENST00000395722 RABEP1Q15276 862 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 GIMAP6Q6P9H5 292 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 IFNL3Q8IZI9 196 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 CRNKL1Q9BZJ0 848 aaKnown RBP18.04■□□□□ 0.48
PTPN20-206ENST00000395722 ADAMTSL1Q8N6G6 1762 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 F8W031 263 aaPredicted RBP18.04■□□□□ 0.48
PTPN20-206ENST00000395722 LMNB1P20700 586 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 BTDP43251 543 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 RHBDL3P58872 404 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 CIAPIN1Q6FI81 312 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 KIAA0825Q8IV33 1275 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 AGBL3Q8NEM8 1001 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
PTPN20-206ENST00000395722 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
PTPN20-206ENST00000395722 TEKT1Q969V4 418 aa18.03■□□□□ 0.48
PTPN20-206ENST00000395722 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
PTPN20-206ENST00000395722 TM6SF1Q9BZW5 370 aa18.03■□□□□ 0.48
PTPN20-206ENST00000395722 SERPINA10Q9UK55 444 aa18.03■□□□□ 0.48
PTPN20-206ENST00000395722 CDK5RAP2Q96SN8 1893 aa18.03■□□□□ 0.48
PTPN20-206ENST00000395722 PLCG2P16885 1265 aa18.02■□□□□ 0.48
PTPN20-206ENST00000395722 CRKP46108 304 aa18.02■□□□□ 0.48
PTPN20-206ENST00000395722 SCNN1DP51172 638 aa18.02■□□□□ 0.48
PTPN20-206ENST00000395722 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
PTPN20-206ENST00000395722 ZDHHC15Q96MV8 337 aa18.02■□□□□ 0.48
PTPN20-206ENST00000395722 NACAP1Q9BZK3 213 aa18.02■□□□□ 0.48
PTPN20-206ENST00000395722 MKRN1Q9UHC7 482 aaKnown RBP18.02■□□□□ 0.48
PTPN20-206ENST00000395722 APPP05067 770 aa18.02■□□□□ 0.47
PTPN20-206ENST00000395722 TNIP1Q15025 636 aa18.02■□□□□ 0.47
PTPN20-206ENST00000395722 APOBEC3HQ6NTF7 200 aaKnown RBP18.02■□□□□ 0.47
PTPN20-206ENST00000395722 SDR42E1Q8WUS8 393 aa18.02■□□□□ 0.47
PTPN20-206ENST00000395722 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.47
PTPN20-206ENST00000395722 FOCADQ5VW36 1801 aa18.01■□□□□ 0.47
PTPN20-206ENST00000395722 TIAM2Q8IVF5 1701 aa18.01■□□□□ 0.47
PTPN20-206ENST00000395722 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
PTPN20-206ENST00000395722 NAPBQ9H115 298 aa18.01■□□□□ 0.47
PTPN20-206ENST00000395722 KRT32Q14532 448 aa18■□□□□ 0.47
PTPN20-206ENST00000395722 IMMTQ16891 758 aaKnown RBP18■□□□□ 0.47
PTPN20-206ENST00000395722 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
PTPN20-206ENST00000395722 NBPF3Q9H094 633 aa18■□□□□ 0.47
PTPN20-206ENST00000395722 DCP1AQ9NPI6 582 aaPredicted RBP18■□□□□ 0.47
PTPN20-206ENST00000395722 DDX60LQ5H9U9 1706 aaKnown RBP18■□□□□ 0.47
PTPN20-206ENST00000395722 STOX1Q6ZVD7 989 aa18■□□□□ 0.47
PTPN20-206ENST00000395722 RPS12P25398 132 aaKnown RBP17.99■□□□□ 0.47
PTPN20-206ENST00000395722 MMP14P50281 582 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
PTPN20-206ENST00000395722 SNX21Q969T3 373 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 ZSWIM6Q9HCJ5 1215 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
PTPN20-206ENST00000395722 BAZ2AQ9UIF9 1905 aaKnown RBP17.99■□□□□ 0.47
PTPN20-206ENST00000395722 ECM29Q5VYK3 1845 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 TDO2P48775 406 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 ANAPC4Q9UJX5 808 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 NAV1Q8NEY1 1877 aa17.99■□□□□ 0.47
PTPN20-206ENST00000395722 ZNF213O14771 459 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 PSMA5P28066 241 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 SBK1Q52WX2 424 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 CDC42EP5Q6NZY7 148 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 MTMR14Q8NCE2 650 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 DDRGK1Q96HY6 314 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 JAKMIP1Q96N16 626 aaKnown RBP17.98■□□□□ 0.47
PTPN20-206ENST00000395722 LAMB1P07942 1786 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
PTPN20-206ENST00000395722 E7EWF7 191 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 USP17L8P0C7I0 530 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 HAND2P61296 217 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 CFAP100Q494V2 611 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
PTPN20-206ENST00000395722 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PTPN20-206ENST00000395722 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
PTPN20-206ENST00000395722 CTR9Q6PD62 1173 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 TBC1D10CQ8IV04 446 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 DPF2Q92785 391 aa17.97■□□□□ 0.47
PTPN20-206ENST00000395722 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
PTPN20-206ENST00000395722 USP5P45974 858 aa17.96■□□□□ 0.47
PTPN20-206ENST00000395722 COL9A3Q14050 684 aaPredicted RBP17.96■□□□□ 0.47
PTPN20-206ENST00000395722 TGFBRAP1Q8WUH2 860 aa17.96■□□□□ 0.47
PTPN20-206ENST00000395722 TTC14Q96N46 770 aa17.96■□□□□ 0.47
PTPN20-206ENST00000395722 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
PTPN20-206ENST00000395722 USP40Q9NVE5 1235 aa17.96■□□□□ 0.47
PTPN20-206ENST00000395722 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
PTPN20-206ENST00000395722 FLT1P17948 1338 aa17.96■□□□□ 0.47
PTPN20-206ENST00000395722 CASTP20810 708 aaKnown RBP17.95■□□□□ 0.46
PTPN20-206ENST00000395722 NEK4P51957 841 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 PPARAQ07869 468 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 SPDYE2BA6NHP3 402 aa17.95■□□□□ 0.46
PTPN20-206ENST00000395722 USP17L12C9JPN9 530 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms