RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RARAP10276 462 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 NID1P14543 1247 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 POLD1P28340 1107 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
AP3S1-202ENST00000395548 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 KRT28Q7Z3Y7 464 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 JPH1Q9HDC5 661 aaPredicted RBP8.37□□□□□ -1.07
AP3S1-202ENST00000395548 WDR90Q96KV7 1748 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 CEP162Q5TB80 1403 aa8.37□□□□□ -1.07
AP3S1-202ENST00000395548 METP08581 1390 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 RGS9O75916 674 aaPredicted RBP8.36□□□□□ -1.07
AP3S1-202ENST00000395548 EGFRP00533 1210 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.073e-7■□□□□ 10.4
AP3S1-202ENST00000395548 TARSP26639 723 aaKnown RBP8.36□□□□□ -1.07
AP3S1-202ENST00000395548 CHRNA4P43681 627 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 DHX32Q7L7V1 743 aaKnown RBP8.36□□□□□ -1.07
AP3S1-202ENST00000395548 RGL4Q8IZJ4 473 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
AP3S1-202ENST00000395548 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 GCC2Q8IWJ2 1684 aa8.36□□□□□ -1.07
AP3S1-202ENST00000395548 ARHGEF10O15013 1369 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 KIF15Q9NS87 1388 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 SPATA31A1Q5TZJ5 1347 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 XYLBO75191 536 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 FSTL1Q12841 308 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 TRPM4Q8TD43 1214 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 MKNK1Q9BUB5 465 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 SAP130Q9H0E3 1048 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 MYO5BQ9ULV0 1848 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 TNS3Q68CZ2 1445 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 RGPD3A6NKT7 1758 aaPredicted RBP8.35□□□□□ -1.07
AP3S1-202ENST00000395548 RGPD4Q7Z3J3 1758 aa8.35□□□□□ -1.07
AP3S1-202ENST00000395548 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
AP3S1-202ENST00000395548 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
AP3S1-202ENST00000395548 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
AP3S1-202ENST00000395548 DHX57Q6P158 1386 aaKnown RBP8.34□□□□□ -1.07
AP3S1-202ENST00000395548 CPB1P15086 417 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 ATP2B4P23634 1241 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 GATA4P43694 442 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 RGS19P49795 217 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 RAC1P63000 192 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 GPLD1P80108 840 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 HTRA3P83110 453 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 NAA30Q147X3 362 aaPredicted RBP8.33□□□□□ -1.08
AP3S1-202ENST00000395548 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 C16orf71Q8IYS4 520 aaPredicted RBP8.33□□□□□ -1.08
AP3S1-202ENST00000395548 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 PRDM10Q9NQV6 1147 aa8.33□□□□□ -1.08
AP3S1-202ENST00000395548 TLR7Q9NYK1 1049 aaKnown RBP8.33□□□□□ -1.08
AP3S1-202ENST00000395548 HFM1A2PYH4 1435 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 ADAM23O75077 832 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
AP3S1-202ENST00000395548 NRLP54845 237 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 NLGN2Q8NFZ4 835 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 NAGPAQ9UK23 515 aa8.32□□□□□ -1.08
AP3S1-202ENST00000395548 ZBTB42B2RXF5 422 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 K7ELQ4 463 aaPredicted RBP8.31□□□□□ -1.08
AP3S1-202ENST00000395548 PSAPP07602 524 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 ABTB2Q8N961 1025 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 TTC9Q92623 222 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 RRP7BPQ9NSQ0 103 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 STIM2Q9P246 746 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 KCNMB2Q9Y691 235 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 SBNO1A3KN83 1393 aa8.31□□□□□ -1.08
AP3S1-202ENST00000395548 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
AP3S1-202ENST00000395548 A0A0A0MRY4 1105 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 PLAURQ03405 335 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 TXNRD1Q16881 649 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 PERM1Q5SV97 790 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
AP3S1-202ENST00000395548 FNDC3AQ9Y2H6 1198 aaKnown RBP8.3□□□□□ -1.08
AP3S1-202ENST00000395548 C9orf172C9J069 976 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 FURINP09958 794 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 ELNP15502 786 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 NLRP13Q86W25 1043 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 ABHD8Q96I13 439 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 ROBO2Q9HCK4 1378 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 OVOS2A0A0G2JMS6 1433 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 OVOS2A0A0J9YW53 1432 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 OVOS2Q6IE36 1432 aa8.29□□□□□ -1.08
AP3S1-202ENST00000395548 CDC42BPGQ6DT37 1551 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 MMP20O60882 483 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
AP3S1-202ENST00000395548 SOX18P35713 384 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 ZAP70P43403 619 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 GRIK4Q16099 956 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 MSL1Q68DK7 614 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 DMRTC2Q8IXT2 367 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms