RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
SCAF11-204ENST00000395454 RAI14Q9P0K7 980 aa17.98■□□□□ 0.47
SCAF11-204ENST00000395454 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
SCAF11-204ENST00000395454 GRIK5Q16478 980 aa17.97■□□□□ 0.47
SCAF11-204ENST00000395454 KIAA0825Q8IV33 1275 aa17.97■□□□□ 0.47
SCAF11-204ENST00000395454 SPTY2D1Q68D10 685 aaPredicted RBP17.96■□□□□ 0.47
SCAF11-204ENST00000395454 DZIP1Q86YF9 867 aaKnown RBP17.96■□□□□ 0.47
SCAF11-204ENST00000395454 MYO3BQ8WXR4 1341 aa17.96■□□□□ 0.47
SCAF11-204ENST00000395454 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.47
SCAF11-204ENST00000395454 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
SCAF11-204ENST00000395454 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
SCAF11-204ENST00000395454 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
SCAF11-204ENST00000395454 GPC2Q8N158 579 aa17.96■□□□□ 0.47
SCAF11-204ENST00000395454 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
SCAF11-204ENST00000395454 TTF2Q9UNY4 1162 aaKnown RBP17.96■□□□□ 0.47
SCAF11-204ENST00000395454 DDNO94850 711 aaPredicted RBP17.95■□□□□ 0.46
SCAF11-204ENST00000395454 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
SCAF11-204ENST00000395454 ZSCAN31Q96LW9 406 aaPredicted RBP17.95■□□□□ 0.46
SCAF11-204ENST00000395454 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCAF11-204ENST00000395454 SH2B1Q9NRF2 756 aaPredicted RBP17.95■□□□□ 0.46
SCAF11-204ENST00000395454 TAF6LQ9Y6J9 622 aa17.95■□□□□ 0.46
SCAF11-204ENST00000395454 PTMSP20962 102 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 SLC9C2Q5TAH2 1124 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 AGBL3Q8NEM8 1001 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 APPBP2Q92624 585 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 ZDHHC9Q9Y397 364 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 CYP21A2P08686 494 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 RPS6KB1P23443 525 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 MECOMQ03112 1051 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 MAGEB6Q8N7X4 407 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 OSBP2Q969R2 916 aa17.94■□□□□ 0.46
SCAF11-204ENST00000395454 M0R2C6 588 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
SCAF11-204ENST00000395454 GMPSP49915 693 aaPredicted RBP17.93■□□□□ 0.46
SCAF11-204ENST00000395454 SCNN1DP51172 638 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 PKP1Q13835 747 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 ZSCAN25Q6NSZ9 544 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 BLOC1S2Q6QNY1 142 aa17.93■□□□□ 0.46
SCAF11-204ENST00000395454 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
SCAF11-204ENST00000395454 BRD1O95696 1058 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 CPA1P15085 419 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 RPS12P25398 132 aaKnown RBP17.92■□□□□ 0.46
SCAF11-204ENST00000395454 GSE1Q14687 1217 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 UBE3CQ15386 1083 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 SLFNL1Q499Z3 407 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
SCAF11-204ENST00000395454 OGFOD1Q8N543 542 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 GMLQ99445 158 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 FOXP2O15409 715 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 USP17L8P0C7I0 530 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 PDE6AP16499 860 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 ADD2P35612 726 aa17.92■□□□□ 0.46
SCAF11-204ENST00000395454 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SCAF11-204ENST00000395454 BAG4O95429 457 aaKnown RBP17.91■□□□□ 0.46
SCAF11-204ENST00000395454 ZNF384Q8TF68 577 aa17.91■□□□□ 0.46
SCAF11-204ENST00000395454 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SCAF11-204ENST00000395454 MYH2Q9UKX2 1941 aa17.91■□□□□ 0.46
SCAF11-204ENST00000395454 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 COL9A3Q14050 684 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 ZNF532Q9HCE3 1301 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 MAST2Q6P0Q8 1798 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 SHTN1A0MZ66 631 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 HMGB1P09429 215 aaKnown RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 CYP7A1P22680 504 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 RBM5P52756 815 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 DPF2Q92785 391 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 TEKT1Q969V4 418 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 NEK1Q96PY6 1258 aa17.9■□□□□ 0.46
SCAF11-204ENST00000395454 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
SCAF11-204ENST00000395454 TCRBV5S4A2TA0A5A2 114 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 LARGE1O95461 756 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 GSTO1P78417 241 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.45
SCAF11-204ENST00000395454 ADGRA1Q86SQ6 560 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
SCAF11-204ENST00000395454 IGSF3O75054 1194 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 CRKP46108 304 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 STOX1Q6ZVD7 989 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 GPRC5DQ9NZD1 345 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 TPCN1Q9ULQ1 816 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 TRAK2O60296 914 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
SCAF11-204ENST00000395454 ME3Q16798 604 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 AGXT2Q9BYV1 514 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 PUS7LQ9H0K6 701 aaKnown RBP17.88■□□□□ 0.45
SCAF11-204ENST00000395454 SERPINA10Q9UK55 444 aa17.88■□□□□ 0.45
SCAF11-204ENST00000395454 ADAMTSL1Q8N6G6 1762 aa17.87■□□□□ 0.45
SCAF11-204ENST00000395454 MROH7-TTC4A0A0A0MT08 1334 aa17.87■□□□□ 0.45
SCAF11-204ENST00000395454 H7C1D1 291 aa17.87■□□□□ 0.45
SCAF11-204ENST00000395454 LDHCP07864 332 aa17.87■□□□□ 0.45
SCAF11-204ENST00000395454 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms