RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ST5P78524 1137 aa18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 CERKQ8TCT0 537 aa18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 ESR2Q92731 530 aa18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
SMARCD1-202ENST00000394963 FSD2A1L4K1 749 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 SLC3A2P08195 630 aaKnown RBP18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 ZNF444Q8N0Y2 327 aaPredicted RBP18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 TGFBRAP1Q8WUH2 860 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 NFIXQ14938 502 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 MED23Q9ULK4 1368 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 NTSR2O95665 410 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 AKNAD1Q5T1N1 836 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 V9GY48 417 aaPredicted RBP18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 NEDD4P46934 1319 aa18.45■□□□□ 0.54
SMARCD1-202ENST00000394963 RPAP1Q9BWH6 1393 aaPredicted RBP18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 CYP2D6P10635 497 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 KLHL10Q6JEL2 608 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 CTCFLQ8NI51 663 aaPredicted RBP18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 NMT2O60551 498 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 PFKFB2O60825 505 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 RNF41Q9H4P4 317 aaPredicted RBP18.44■□□□□ 0.54
SMARCD1-202ENST00000394963 SCNN1DP51172 638 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 OLFM4Q6UX06 510 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 ZNF804BA4D1E1 1349 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 CDK11BP21127 795 aaKnown RBP18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 GTF2IP78347 998 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 TYRO3Q06418 890 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 PPARAQ07869 468 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 CLIC4Q9Y696 253 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 XBP1P17861 261 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 KRT23Q9C075 422 aa18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
SMARCD1-202ENST00000394963 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 UBE3CQ15386 1083 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 DYNLL2Q96FJ2 89 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 CABP5Q9NP86 173 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 EP400Q96L91 3159 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 SERPINB2P05120 415 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 CDHR2Q9BYE9 1310 aa18.42■□□□□ 0.54
SMARCD1-202ENST00000394963 BTBD18B2RXH4 712 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 SPTLC2O15270 562 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 USP17L8P0C7I0 530 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 CLIC6Q96NY7 704 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 NLRP5P59047 1200 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 ZNF445P59923 1031 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 APOA5Q6Q788 366 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 EPB41L2O43491 1005 aaKnown RBP18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 TCP10Q12799 353 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 STAMQ92783 540 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 FAM84BQ96KN1 310 aaPredicted RBP18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 PLIN2Q99541 437 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 NARFQ9UHQ1 456 aa18.41■□□□□ 0.54
SMARCD1-202ENST00000394963 TNKSO95271 1327 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 PTPN21Q16825 1174 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 CPVLQ9H3G5 476 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 ZSCAN30Q86W11 494 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
SMARCD1-202ENST00000394963 GOLGA6L6A8MZA4 724 aa18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 AFMP43652 599 aa18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 RBM10P98175 930 aaKnown RBP18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 MECOMQ03112 1051 aa18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.54
SMARCD1-202ENST00000394963 CDC27P30260 824 aa18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 MFSD14BQ5SR56 506 aa18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 KRT27Q7Z3Y8 459 aa18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 EVX2Q03828 476 aa18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
SMARCD1-202ENST00000394963 GSG1L2A8MUP6 293 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 PDE4BQ07343 736 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 KAT14Q9H8E8 782 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 NR5A1Q13285 461 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 VPS72Q15906 364 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 CNNM2Q9H8M5 875 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 BRMS1Q9HCU9 246 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 FAM13BQ9NYF5 915 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
SMARCD1-202ENST00000394963 CTDNEP1O95476 244 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms