RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.21
SIN3A-202ENST00000394947 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
SIN3A-202ENST00000394947 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
SIN3A-202ENST00000394947 SPTLC2O15270 562 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 STX10O60499 249 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 BAG2O95816 211 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 USH1GQ495M9 461 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 A0A1B0GUL7 405 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 KCNH5Q8NCM2 988 aa13.71□□□□□ -0.22
SIN3A-202ENST00000394947 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.22
SIN3A-202ENST00000394947 PDIA4P13667 645 aaKnown RBP13.7□□□□□ -0.22
SIN3A-202ENST00000394947 EVCP57679 992 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 XAB2Q9HCS7 855 aaKnown RBP13.7□□□□□ -0.22
SIN3A-202ENST00000394947 ABCF3Q9NUQ8 709 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 DTHD1Q6ZMT9 781 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 HS2ST1Q7LGA3 356 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 NIP7Q9Y221 180 aaKnown RBP eCLIP13.7□□□□□ -0.22
SIN3A-202ENST00000394947 TTC30BQ8N4P2 665 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 NACADO15069 1562 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 TNNC1P63316 161 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 ITKQ08881 620 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 TMTC4Q5T4D3 741 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
SIN3A-202ENST00000394947 METTL14Q9HCE5 456 aaKnown RBP13.7□□□□□ -0.22
SIN3A-202ENST00000394947 TRPC3Q13507 836 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 ANKRD24Q8TF21 1146 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 EPB41P11171 864 aaKnown RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 ASIC3Q9UHC3 531 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 CCDC62Q6P9F0 684 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 HDXQ7Z353 690 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 PTPDC1A2A3K4 754 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 SKA2Q8WVK7 121 aaPredicted RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 MEIS3Q99687 375 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 UVSSAQ2YD98 709 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 TTC19Q6DKK2 380 aaPredicted RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
SIN3A-202ENST00000394947 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 CACYBPQ9HB71 228 aaKnown RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SIN3A-202ENST00000394947 F13A1P00488 732 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 RIOK3O14730 519 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 OPHN1O60890 802 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 ASIC2Q16515 512 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 VSIG1Q86XK7 387 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 ZGPATQ8N5A5 531 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 XAGE3Q8WTP9 111 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 SYNJ2BP-COX16A0A087WUM0 186 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 NDUFAB1O14561 156 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 CCDC26Q8TAB7 109 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 COX16Q9P0S2 106 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 NSFL1CQ9UNZ2 370 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 ARHGAP42A6NI28 874 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 CETN3O15182 167 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 UHMK1Q8TAS1 419 aaKnown RBP13.68□□□□□ -0.22
SIN3A-202ENST00000394947 PDE4DQ08499 809 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 ERCC6LQ2NKX8 1250 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 POMGNT1Q8WZA1 660 aa13.68□□□□□ -0.22
SIN3A-202ENST00000394947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■□□ 17.2
SIN3A-202ENST00000394947 MAP7Q14244 749 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 RASSF4Q9H2L5 321 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 ZNF365Q70YC5 407 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 RHPN1Q8TCX5 695 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 VPS37BQ9H9H4 285 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 KRT15P19012 456 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 HP1BP3Q5SSJ5 553 aaPredicted RBP13.67□□□□□ -0.22
SIN3A-202ENST00000394947 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 hCG_1642624A0A1W2PR95 340 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 NELFCDQ8IXH7 590 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 INPP1P49441 399 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 SLC12A1Q13621 1099 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 ANLNQ9NQW6 1124 aa13.67□□□□□ -0.22
SIN3A-202ENST00000394947 AKR1B15C9JRZ8 316 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-202ENST00000394947 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 PIK3AP1Q6ZUJ8 805 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 TSGA10Q9BZW7 698 aa13.66□□□□□ -0.22
SIN3A-202ENST00000394947 TXKP42681 527 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms