RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ATP6V1AP38606 617 aa21.64■■□□□ 1.06
HOXC6-202ENST00000394331 CEP120Q8N960 986 aa21.64■■□□□ 1.06
HOXC6-202ENST00000394331 BCCIPQ9P287 314 aaKnown RBP eCLIP21.64■■□□□ 1.06
HOXC6-202ENST00000394331 TAF6LQ9Y6J9 622 aa21.64■■□□□ 1.06
HOXC6-202ENST00000394331 ERLIN1O75477 346 aa21.64■■□□□ 1.05
HOXC6-202ENST00000394331 MSANTD4Q8NCY6 345 aa21.64■■□□□ 1.05
HOXC6-202ENST00000394331 UTP14AQ9BVJ6 771 aaKnown RBP21.64■■□□□ 1.05
HOXC6-202ENST00000394331 IKBKBO14920 756 aa21.63■■□□□ 1.05
HOXC6-202ENST00000394331 KIFC2Q96AC6 838 aa21.63■■□□□ 1.05
HOXC6-202ENST00000394331 COL9A3Q14050 684 aaPredicted RBP21.63■■□□□ 1.05
HOXC6-202ENST00000394331 NAA16Q6N069 864 aaPredicted RBP21.63■■□□□ 1.05
HOXC6-202ENST00000394331 GPR108Q9NPR9 543 aa21.63■■□□□ 1.05
HOXC6-202ENST00000394331 AKAP2Q9Y2D5 859 aa21.63■■□□□ 1.05
HOXC6-202ENST00000394331 KBTBD3Q8NAB2 608 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 ANKRD20A12PQ8NF67 263 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 BRF1Q92994 677 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 CWC25Q9NXE8 425 aaPredicted RBP21.62■■□□□ 1.05
HOXC6-202ENST00000394331 CBFA2T2O43439 604 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 MYO1BO43795 1136 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 MAP2K2P36507 400 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 FOXO4P98177 505 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 CARD10Q9BWT7 1032 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 L1RE1Q9UN81 338 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 PPP2R2CQ9Y2T4 447 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 PRR29P0C7W0 189 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 USP8P40818 1118 aa21.62■■□□□ 1.05
HOXC6-202ENST00000394331 DNAJC21Q5F1R6 531 aaKnown RBP21.62■■□□□ 1.05
HOXC6-202ENST00000394331 PCDH11XQ9BZA7 1347 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 PCDH11YQ9BZA8 1340 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 NBPF26B4DH59 902 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 TUBBP07437 444 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 NBPF14Q5TI25 921 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 NBPF10Q6P3W6 841 aaKnown RBP21.61■■□□□ 1.05
HOXC6-202ENST00000394331 FMR1NBQ8N0W7 255 aaPredicted RBP21.61■■□□□ 1.05
HOXC6-202ENST00000394331 NBPF15Q8N660 670 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 ZNF609O15014 1411 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 ARFGEF2Q9Y6D5 1785 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 NCAPHQ15003 741 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 KIAA1468Q9P260 1216 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 FAN1Q9Y2M0 1017 aa21.61■■□□□ 1.05
HOXC6-202ENST00000394331 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 H3BQV1 296 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 TRDNQ13061 729 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 TUBB2AQ13885 445 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 ZCRB1Q8TBF4 217 aaKnown RBP21.6■■□□□ 1.05
HOXC6-202ENST00000394331 DDX11Q96FC9 970 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 ZNF396Q96N95 335 aaPredicted RBP21.6■■□□□ 1.05
HOXC6-202ENST00000394331 TUBB2BQ9BVA1 445 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 SH3TC1Q8TE82 1336 aa21.6■■□□□ 1.05
HOXC6-202ENST00000394331 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
HOXC6-202ENST00000394331 IL15P40933 162 aaPredicted RBP21.6■■□□□ 1.05
HOXC6-202ENST00000394331 A0A1W2PQ27 194 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 A0A1W2PQ64 194 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 A0A1W2PQD8 194 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 HMGB1P09429 215 aaKnown RBP21.59■■□□□ 1.05
HOXC6-202ENST00000394331 FANCCQ00597 558 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 DDX46Q7L014 1031 aaKnown RBP21.59■■□□□ 1.05
HOXC6-202ENST00000394331 TMEM139Q8IV31 216 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 ACBD3Q9H3P7 528 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 STK3Q13188 491 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 SRGAP1Q7Z6B7 1085 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 WDR24Q96S15 920 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 LLPHQ9BRT6 129 aaKnown RBP21.59■■□□□ 1.05
HOXC6-202ENST00000394331 GBP3Q9H0R5 595 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 NDUFB9Q9Y6M9 179 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 GNG11P61952 73 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 SATB1Q01826 763 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 E2F4Q16254 413 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 DPCR1Q3MIW9 517 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 FSIP1Q8NA03 581 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 HELLSQ9NRZ9 838 aa21.59■■□□□ 1.05
HOXC6-202ENST00000394331 PALLDQ8WX93 1383 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 PARP4Q9UKK3 1724 aaKnown RBP21.58■■□□□ 1.05
HOXC6-202ENST00000394331 CYP21A2P08686 494 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 NLRP12P59046 1061 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 ANKZF1Q9H8Y5 726 aa21.58■■□□□ 1.05
HOXC6-202ENST00000394331 HSP90B2PQ58FF3 399 aa21.58■■□□□ 1.04
HOXC6-202ENST00000394331 CCDC129Q6ZRS4 1044 aa21.58■■□□□ 1.04
HOXC6-202ENST00000394331 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.04
HOXC6-202ENST00000394331 MRPS27Q92552 414 aaKnown RBP21.58■■□□□ 1.04
HOXC6-202ENST00000394331 SEC62Q99442 399 aaKnown RBP21.58■■□□□ 1.04
HOXC6-202ENST00000394331 A1CFQ9NQ94 594 aaKnown RBP21.58■■□□□ 1.04
HOXC6-202ENST00000394331 SUFUQ9UMX1 484 aa21.58■■□□□ 1.04
HOXC6-202ENST00000394331 WDR17Q8IZU2 1322 aa21.58■■□□□ 1.04
HOXC6-202ENST00000394331 CHMP4BP1P59074 171 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 TTLL7Q6ZT98 887 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 Q6ZUG5 572 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 CEP112Q8N8E3 955 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 CNNM3Q8NE01 707 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 GLI3P10071 1580 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 VSTM4Q8IW00 320 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 PAG1Q9NWQ8 432 aa21.57■■□□□ 1.04
HOXC6-202ENST00000394331 MCM6Q14566 821 aa21.56■■□□□ 1.04
HOXC6-202ENST00000394331 TOM1L2Q6ZVM7 507 aa21.56■■□□□ 1.04
HOXC6-202ENST00000394331 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
HOXC6-202ENST00000394331 DSCC1Q9BVC3 393 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms