RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TAF1CQ15572 869 aaPredicted RBP21.81■■□□□ 1.08
SNRPA1-202ENST00000394082 FAM151AQ8WW52 585 aa21.81■■□□□ 1.08
SNRPA1-202ENST00000394082 CEP126Q9P2H0 1117 aa21.81■■□□□ 1.08
SNRPA1-202ENST00000394082 RBBP6Q7Z6E9 1792 aaKnown RBP21.81■■□□□ 1.08
SNRPA1-202ENST00000394082 BRCA2P51587 3418 aa21.81■■□□□ 1.08
SNRPA1-202ENST00000394082 IL15P40933 162 aaPredicted RBP21.8■■□□□ 1.08
SNRPA1-202ENST00000394082 PPIL2Q13356 520 aa21.8■■□□□ 1.08
SNRPA1-202ENST00000394082 SNAPC2Q13487 334 aa21.8■■□□□ 1.08
SNRPA1-202ENST00000394082 FAM43AQ8N2R8 423 aa21.8■■□□□ 1.08
SNRPA1-202ENST00000394082 ZNF341Q9BYN7 854 aa21.8■■□□□ 1.08
SNRPA1-202ENST00000394082 PPATQ06203 517 aa21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 ATP2B3Q16720 1220 aa21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 COPRSQ9NQ92 184 aa21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 ZNF112Q9UJU3 913 aa21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 DAGLAQ9Y4D2 1042 aa21.79■■□□□ 1.08
SNRPA1-202ENST00000394082 IRF6O14896 467 aa21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 TLR2O60603 784 aa21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 ZKSCAN4Q969J2 545 aaPredicted RBP21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 PCDH10Q9P2E7 1040 aa21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 DENND2AQ9ULE3 1009 aa21.78■■□□□ 1.08
SNRPA1-202ENST00000394082 GNRH1P01148 92 aa21.77■■□□□ 1.08
SNRPA1-202ENST00000394082 LDHBP07195 334 aaKnown RBP21.77■■□□□ 1.08
SNRPA1-202ENST00000394082 CAP1Q01518 475 aa21.77■■□□□ 1.08
SNRPA1-202ENST00000394082 CDC42EP5Q6NZY7 148 aa21.77■■□□□ 1.08
SNRPA1-202ENST00000394082 ZGPATQ8N5A5 531 aaKnown RBP21.77■■□□□ 1.08
SNRPA1-202ENST00000394082 PDS5AQ29RF7 1337 aaKnown RBP21.77■■□□□ 1.07
SNRPA1-202ENST00000394082 PRDX5P30044 214 aa21.76■■□□□ 1.07
SNRPA1-202ENST00000394082 SIL1Q9H173 461 aa21.76■■□□□ 1.07
SNRPA1-202ENST00000394082 LRRFIP2Q9Y608 721 aaKnown RBP21.76■■□□□ 1.07
SNRPA1-202ENST00000394082 POTEFA5A3E0 1075 aa21.75■■□□□ 1.07
SNRPA1-202ENST00000394082 BTBD19C9JJ37 291 aa21.75■■□□□ 1.07
SNRPA1-202ENST00000394082 NOL9Q5SY16 702 aaKnown RBP21.75■■□□□ 1.07
SNRPA1-202ENST00000394082 NBPF11Q86T75 865 aa21.75■■□□□ 1.07
SNRPA1-202ENST00000394082 CCER2I3L3R5 266 aa21.74■■□□□ 1.07
SNRPA1-202ENST00000394082 DIXDC1Q155Q3 683 aa21.74■■□□□ 1.07
SNRPA1-202ENST00000394082 MIGA2Q7L4E1 593 aa21.74■■□□□ 1.07
SNRPA1-202ENST00000394082 ZNF333Q96JL9 665 aa21.74■■□□□ 1.07
SNRPA1-202ENST00000394082 KCNH4Q9UQ05 1017 aa21.74■■□□□ 1.07
SNRPA1-202ENST00000394082 PHKA1P46020 1223 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 PRMT2P55345 433 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 MTX1Q13505 466 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 ANKRD23Q86SG2 305 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 FAM163AQ96GL9 167 aaPredicted RBP21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 IDI2Q9BXS1 227 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 FAM198AQ9UFP1 575 aa21.73■■□□□ 1.07
SNRPA1-202ENST00000394082 GNAI3P08754 354 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 INPP5BP32019 993 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 LACTBP83111 547 aaPredicted RBP21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 NFIAQ12857 509 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 KIF22Q14807 665 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 CCDC102BQ68D86 513 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 MEIS3Q99687 375 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 USP40Q9NVE5 1235 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 GAKO14976 1311 aa21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 KIAA0100Q14667 2235 aaKnown RBP21.72■■□□□ 1.07
SNRPA1-202ENST00000394082 ENTPD3O75355 529 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 TCP10Q12799 353 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 SLC9C1Q4G0N8 1177 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 C17orf99Q6UX52 265 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 SLF2Q8IX21 1173 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 TMEM106CQ9BVX2 250 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 AKAP2Q9Y2D5 859 aa21.71■■□□□ 1.07
SNRPA1-202ENST00000394082 MAP3K10Q02779 954 aa21.7■■□□□ 1.06
SNRPA1-202ENST00000394082 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
SNRPA1-202ENST00000394082 PTCH2Q9Y6C5 1203 aa21.7■■□□□ 1.06
SNRPA1-202ENST00000394082 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
SNRPA1-202ENST00000394082 CXCL11O14625 94 aa21.69■■□□□ 1.06
SNRPA1-202ENST00000394082 SPTY2D1Q68D10 685 aaPredicted RBP21.69■■□□□ 1.06
SNRPA1-202ENST00000394082 RFX7Q2KHR2 1363 aa21.69■■□□□ 1.06
SNRPA1-202ENST00000394082 MOGSQ13724 837 aa21.68■■□□□ 1.06
SNRPA1-202ENST00000394082 RASGRF1Q13972 1273 aa21.68■■□□□ 1.06
SNRPA1-202ENST00000394082 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 MYH2Q9UKX2 1941 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 ADGRA2Q96PE1 1338 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 PHF20L1A8MW92 1017 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 PDHXO00330 501 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 SRGAP3O43295 1099 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 EN2P19622 333 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 ADORA1P30542 326 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 TIMM10P62072 90 aa21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 MVPQ14764 893 aaKnown RBP21.67■■□□□ 1.06
SNRPA1-202ENST00000394082 A0A1B0GUL7 405 aa21.66■■□□□ 1.06
SNRPA1-202ENST00000394082 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
SNRPA1-202ENST00000394082 RGS3P49796 1198 aa21.66■■□□□ 1.06
SNRPA1-202ENST00000394082 DZIP1Q86YF9 867 aaKnown RBP21.66■■□□□ 1.06
SNRPA1-202ENST00000394082 MAP4K4O95819 1239 aaPredicted RBP21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 HOXD10P28358 340 aa21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 ZFPM1Q8IX07 1006 aa21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 SCYL3Q8IZE3 742 aa21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 XAGE2Q96GT9 111 aa21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
SNRPA1-202ENST00000394082 DOCK2Q92608 1830 aa21.64■■□□□ 1.06
SNRPA1-202ENST00000394082 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
SNRPA1-202ENST00000394082 PARK7Q99497 189 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms