RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 VSTM4Q8IW00 320 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 XAGE3Q8WTP9 111 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 MYCBPQ99417 103 aaPredicted RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 TSG101Q99816 390 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 COPRSQ9NQ92 184 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 RRP15Q9Y3B9 282 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 USP6P35125 1406 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CALM1P0DP23 149 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CALM2P0DP24 149 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CALM3P0DP25 149 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 USHBP1Q8N6Y0 703 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 KCNB2Q92953 911 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 BMP2KQ9NSY1 1161 aaPredicted RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 BICDL2A1A5D9 508 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 E7EWF7 191 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 SLC39A14Q15043 492 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 TMX1Q9H3N1 280 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 KCND1Q9NSA2 647 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 RHOXF2BP0C7M4 288 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 APBA1Q02410 837 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 SCRN1Q12765 414 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 WTAPQ15007 396 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 RRAGBQ5VZM2 374 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 LINC00301Q8NCQ3 95 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 NEK11Q8NG66 645 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 APPBP2Q92624 585 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 EAF2Q96CJ1 260 aaPredicted RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 SUCLG2Q96I99 432 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 RHOXF2Q9BQY4 288 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 SYNRGQ9UMZ2 1314 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 SLFN14P0C7P3 912 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 COPS6Q7L5N1 327 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 L2HGDHQ9H9P8 463 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 GOLGA6CA6NDK9 693 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 GOLGA6DP0CG33 693 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 EZRP15311 586 aaKnown RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 IQCB1Q15051 598 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 VPS36Q86VN1 386 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 PANX2Q96RD6 677 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 TEX13AQ9BXU3 409 aaPredicted RBP9.75□□□□□ -0.85
GABRA1-202ENST00000393943 GOLGA6AQ9NYA3 693 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 FBXO3Q9UK99 471 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
GABRA1-202ENST00000393943 ANXA1P04083 346 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 INPP5BP32019 993 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 NDUFA8P51970 172 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 RNF187Q5TA31 235 aaPredicted RBP9.74□□□□□ -0.85
GABRA1-202ENST00000393943 LMBR1LQ6UX01 489 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 FERMT2Q96AC1 680 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
GABRA1-202ENST00000393943 ANKRD26Q9UPS8 1709 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 GOLGA8KD6RF30 607 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 DEXIO95424 95 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 MTIF2P46199 727 aaKnown RBP9.74□□□□□ -0.85
GABRA1-202ENST00000393943 HAND2P61296 217 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 SKIDA1Q1XH10 827 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 HAUS4Q9H6D7 363 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 SALL3Q9BXA9 1300 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 CRB1P82279 1406 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 A0A087WUV0 522 aaPredicted RBP9.74□□□□□ -0.85
GABRA1-202ENST00000393943 MAGEA9P43362 315 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 GCKRQ14397 625 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 CACNA2D4Q7Z3S7 1137 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 GPATCH11Q8N954 259 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 IL17REQ8NFR9 667 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 PGBD1Q96JS3 809 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 NCAPD2Q15021 1401 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 SLC5A1P13866 664 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 KIF5BP33176 963 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 CCDC144BQ3MJ40 725 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 CC2D1AQ6P1N0 951 aaPredicted RBP9.74□□□□□ -0.85
GABRA1-202ENST00000393943 CCDC144CPQ8IYA2 1237 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 C19orf44Q9H6X5 657 aa9.74□□□□□ -0.85
GABRA1-202ENST00000393943 ANKRD18BA2A2Z9 1011 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
GABRA1-202ENST00000393943 PLCD1P51178 756 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 CCZ1BP86790 482 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 CCZ1P86791 482 aaPredicted RBP9.73□□□□□ -0.85
GABRA1-202ENST00000393943 ENOX1Q8TC92 643 aaKnown RBP9.73□□□□□ -0.85
GABRA1-202ENST00000393943 TRIM47Q96LD4 638 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 CENPHQ9H3R5 247 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 TBX22Q9Y458 520 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 GOLGA6BA6NDN3 693 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 DPCR1Q3MIW9 517 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 INCENPQ9NQS7 918 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 AK9Q5TCS8 1911 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 SEMA3EO15041 775 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 CALML3P27482 149 aa9.73□□□□□ -0.85
GABRA1-202ENST00000393943 TOB2Q14106 344 aaPredicted RBP9.73□□□□□ -0.85
GABRA1-202ENST00000393943 CCDC122Q5T0U0 273 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms