RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 RAI14Q9P0K7 980 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 ANGEL1Q9UNK9 670 aaKnown RBP9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 PAPPA2Q9BXP8 1791 aa9.41□□□□□ -0.9
HMGB3P1-201ENST00000393368 FAM155AB1AL88 458 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 NF2P35240 595 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 ECE1P42892 770 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 TCP10Q12799 353 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 POTEHQ6S545 545 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 ERICH6Q7L0X2 663 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 RASAL3Q86YV0 1011 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 ZGPATQ8N5A5 531 aaKnown RBP9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 KIF1BPQ96EK5 621 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 TEPSINQ96N21 525 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 PIH1D3Q9NQM4 214 aaKnown RBP9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 USP40Q9NVE5 1235 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.9
HMGB3P1-201ENST00000393368 MROH7-TTC4A0A0A0MT08 1334 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 GAKO14976 1311 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 IFIT2P09913 472 aaKnown RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 BTDP43251 543 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 SPTY2D1Q68D10 685 aaPredicted RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 ZFPM1Q8IX07 1006 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 CLASRPQ8N2M8 674 aaKnown RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 CLMNQ96JQ2 1002 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 MRIQ9BWK5 157 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 TMOD2Q9NZR1 351 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 LRP2BPQ9P2M1 347 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 TSKSQ9UJT2 592 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 ECM29Q5VYK3 1845 aa9.39□□□□□ -0.91
HMGB3P1-201ENST00000393368 FOXN1O15353 648 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 RAB11FIP3O75154 756 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 SLC10A3P09131 477 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 TNNI2P48788 182 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 FKBP1BP68106 108 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 KIF23Q02241 960 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 PICALMQ13492 652 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 TNFAIP1Q13829 316 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 TSHZ3Q63HK5 1081 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 ARMC9Q7Z3E5 817 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 EDC3Q96F86 508 aaKnown RBP9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 DNAJC2Q99543 621 aaKnown RBP9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 LRRCC1Q9C099 1032 aa9.38□□□□□ -0.91
HMGB3P1-201ENST00000393368 RFX7Q2KHR2 1363 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 WDHD1O75717 1129 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 IDH1O75874 414 aaKnown RBP9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 RGS3P49796 1198 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 MIGA2Q7L4E1 593 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 DCTPP1Q9H773 170 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
HMGB3P1-201ENST00000393368 GPR75-ASB3A0A0A6YYF3 556 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 GOLIM4O00461 696 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 MAP2K2P36507 400 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 RHBDL3P58872 404 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 NOGQ13253 232 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 LDLRAD1Q5T700 205 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 MAGEB6Q8N7X4 407 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 MIGA1Q8NAN2 632 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 OTUD7AQ8TE49 926 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 SH3RF3Q8TEJ3 882 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 FAM151AQ8WW52 585 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 FAM163AQ96GL9 167 aaPredicted RBP9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 BOLA2Q9H3K6 86 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 ELP3Q9H9T3 547 aa9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 AATFQ9NY61 560 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGB3P1-201ENST00000393368 MAST2Q6P0Q8 1798 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 DDTLA6NHG4 134 aaPredicted RBP9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 CHGBP05060 677 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 CYP7A1P22680 504 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 GJA5P36382 358 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 IREB2P48200 963 aaKnown RBP9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 LBX1P52954 281 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 DYNLL1P63167 89 aaKnown RBP9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 GSTO1P78417 241 aa9.35□□□□□ -0.91
HMGB3P1-201ENST00000393368 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms