RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
RFC5-201ENST00000392542 IFNL3Q8IZI9 196 aa14.3□□□□□ -0.12
RFC5-201ENST00000392542 MAGEB6Q8N7X4 407 aa14.3□□□□□ -0.12
RFC5-201ENST00000392542 UBE2Q2Q8WVN8 375 aa14.3□□□□□ -0.12
RFC5-201ENST00000392542 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
RFC5-201ENST00000392542 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
RFC5-201ENST00000392542 ZBTB43O43298 467 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 RXRAP19793 462 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 CHAF1AQ13111 956 aaPredicted RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 INTS5Q6P9B9 1019 aaKnown RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 CACTINQ8WUQ7 758 aaKnown RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 MPHOSPH8Q99549 860 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 UTP14AQ9BVJ6 771 aaKnown RBP14.29□□□□□ -0.12
RFC5-201ENST00000392542 NAPBQ9H115 298 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 LY9Q9HBG7 655 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 CCDC87Q9NVE4 849 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 RREB1Q92766 1687 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 LAMB2P55268 1798 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 MBD4O95243 580 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 KRT40Q6A162 431 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 AOPEPQ8N6M6 819 aa14.29□□□□□ -0.12
RFC5-201ENST00000392542 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 CMA1P23946 247 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 LIFRP42702 1097 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 SLC39A14Q15043 492 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 NTRK3Q16288 839 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 NFXL1Q6ZNB6 911 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 BPIFA3Q9BQP9 254 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
RFC5-201ENST00000392542 ZNF202O95125 648 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 GLIPR1L2Q4G1C9 344 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 PARP10Q53GL7 1025 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 PHKBQ93100 1093 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 ARMT1Q9H993 441 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 BCORQ6W2J9 1755 aa14.27□□□□□ -0.12
RFC5-201ENST00000392542 RTL9Q8NET4 1388 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 FAM177BA6PVY3 158 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 SNAP23O00161 211 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 NEMFO60524 1076 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 PFKFB1P16118 471 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 IARSP41252 1262 aaKnown RBP14.27□□□□□ -0.13
RFC5-201ENST00000392542 CTDSPL2Q05D32 466 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.13
RFC5-201ENST00000392542 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.13
RFC5-201ENST00000392542 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
RFC5-201ENST00000392542 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 RANBP6O60518 1105 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 CAMTA2O94983 1202 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 ZRSR1Q15695 479 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 CCDC152Q4G0S7 254 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 LRRC8AQ8IWT6 810 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 ROBO1Q9Y6N7 1651 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 STK36Q9NRP7 1315 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 NID2Q14112 1375 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 PPP6R2O75170 966 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 WDHD1O75717 1129 aaPredicted RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 GNAT2P19087 354 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 NLRP12P59046 1061 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 FBXW7Q969H0 707 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 KRT23Q9C075 422 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 TACC3Q9Y6A5 838 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
RFC5-201ENST00000392542 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
RFC5-201ENST00000392542 CCDC69A6NI79 296 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
RFC5-201ENST00000392542 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
RFC5-201ENST00000392542 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 RBM6P78332 1123 aaKnown RBP14.25□□□□□ -0.13
RFC5-201ENST00000392542 GNL2Q13823 731 aaKnown RBP14.25□□□□□ -0.13
RFC5-201ENST00000392542 TRIM29Q14134 588 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 TIGD1Q96MW7 591 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 SLC12A7Q9Y666 1083 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 NTSR2O95665 410 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 U2AF2P26368 475 aaKnown RBP eCLIP14.25□□□□□ -0.134e-9■■■□□ 19.2
RFC5-201ENST00000392542 PTPAQ15257 358 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 MYL10Q9BUA6 226 aa14.25□□□□□ -0.13
RFC5-201ENST00000392542 MYH14Q7Z406 1995 aaKnown RBP14.25□□□□□ -0.13
RFC5-201ENST00000392542 BCAMP50895 628 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 SSRP1Q08945 709 aaKnown RBP14.24□□□□□ -0.13
RFC5-201ENST00000392542 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 LCORLQ8N3X6 602 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms