RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 WBP1LQ9NX94 342 aa16.08■□□□□ 0.16
MRPL55-219ENST00000391867 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
MRPL55-219ENST00000391867 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 SLC10A3P09131 477 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 TNNI2P48788 182 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 NFIAQ12857 509 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 SUPT20HL1Q3ZLR7 823 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 LRP2BPQ9P2M1 347 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
MRPL55-219ENST00000391867 MROH7-TTC4A0A0A0MT08 1334 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 GAKO14976 1311 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 PPP1R12BO60237 982 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 SMARCA5O60264 1052 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 MAP2K2P36507 400 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 BTDP43251 543 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 KIF23Q02241 960 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 MAP2K1Q02750 393 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 NOGQ13253 232 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 CLMNQ96JQ2 1002 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 PIH1D3Q9NQM4 214 aaKnown RBP16.06■□□□□ 0.16
MRPL55-219ENST00000391867 TSKSQ9UJT2 592 aa16.06■□□□□ 0.16
MRPL55-219ENST00000391867 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
MRPL55-219ENST00000391867 IFIT2P09913 472 aaKnown RBP16.05■□□□□ 0.16
MRPL55-219ENST00000391867 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
MRPL55-219ENST00000391867 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-219ENST00000391867 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-219ENST00000391867 LDLRAD1Q5T700 205 aa16.04■□□□□ 0.16
MRPL55-219ENST00000391867 ZFPM1Q8IX07 1006 aa16.04■□□□□ 0.16
MRPL55-219ENST00000391867 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
MRPL55-219ENST00000391867 ANTXR1Q9H6X2 564 aa16.04■□□□□ 0.16
MRPL55-219ENST00000391867 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
MRPL55-219ENST00000391867 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
MRPL55-219ENST00000391867 IREB2P48200 963 aaKnown RBP16.03■□□□□ 0.16
MRPL55-219ENST00000391867 PICALMQ13492 652 aa16.03■□□□□ 0.16
MRPL55-219ENST00000391867 FKBP1CQ5VVH2 108 aa16.03■□□□□ 0.16
MRPL55-219ENST00000391867 FAM83AQ86UY5 434 aa16.03■□□□□ 0.16
MRPL55-219ENST00000391867 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
MRPL55-219ENST00000391867 OTOFQ9HC10 1997 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
MRPL55-219ENST00000391867 RGS3P49796 1198 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 LBX1P52954 281 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 GSTO1P78417 241 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 MAP3K11Q16584 847 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-219ENST00000391867 MIGA2Q7L4E1 593 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-219ENST00000391867 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
MRPL55-219ENST00000391867 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
MRPL55-219ENST00000391867 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
MRPL55-219ENST00000391867 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 MAST2Q6P0Q8 1798 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 WDHD1O75717 1129 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-219ENST00000391867 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
MRPL55-219ENST00000391867 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-219ENST00000391867 RHBDL3P58872 404 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-219ENST00000391867 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 SLC10A4Q96EP9 437 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 CSRNP1Q96S65 589 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 DNAJC2Q99543 621 aaKnown RBP16.01■□□□□ 0.15
MRPL55-219ENST00000391867 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 ELP3Q9H9T3 547 aa16.01■□□□□ 0.15
MRPL55-219ENST00000391867 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
MRPL55-219ENST00000391867 AK9Q5TCS8 1911 aa16■□□□□ 0.15
MRPL55-219ENST00000391867 LDHCP07864 332 aa16■□□□□ 0.15
MRPL55-219ENST00000391867 SLURP2P0DP57 97 aa16■□□□□ 0.15
MRPL55-219ENST00000391867 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
MRPL55-219ENST00000391867 EDC3Q96F86 508 aaKnown RBP16■□□□□ 0.15
MRPL55-219ENST00000391867 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
MRPL55-219ENST00000391867 VGLL4Q14135 290 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 SPRYD7Q5W111 196 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-219ENST00000391867 SH3BP5LQ7L8J4 393 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■■□ 21.3
MRPL55-219ENST00000391867 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-219ENST00000391867 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 WNK4Q96J92 1243 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 WRNIP1Q96S55 665 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 IDI2Q9BXS1 227 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 BOLA2Q9H3K6 86 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 PCNTO95613 3336 aa15.99■□□□□ 0.15
MRPL55-219ENST00000391867 DDTLA6NHG4 134 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-219ENST00000391867 GOLIM4O00461 696 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 CYP7A1P22680 504 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 GJA5P36382 358 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 MAP3K9P80192 1104 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 TSHZ3Q63HK5 1081 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 MAGEB6Q8N7X4 407 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
MRPL55-219ENST00000391867 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms