RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 ATG3Q9NT62 314 aa3.95□□□□□ -1.78
SNORA40.19-201ENST00000390846 CRIM1Q9NZV1 1036 aa3.95□□□□□ -1.78
SNORA40.19-201ENST00000390846 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 LEFTY1O75610 366 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 NEFMP07197 916 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 RXRBP28702 533 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 CD96P40200 585 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 SERPINB4P48594 390 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 EHHADHQ08426 723 aa3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 SF3B2Q13435 895 aaKnown RBP3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 PRPF40BQ6NWY9 871 aaKnown RBP3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 MBNL3Q9NUK0 354 aaKnown RBP3.94□□□□□ -1.78
SNORA40.19-201ENST00000390846 USP5P45974 858 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 USP11P51784 963 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 PTPN12Q05209 780 aaKnown RBP3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 AKAP4Q5JQC9 854 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 MPRIPQ6WCQ1 1025 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 UBE3DQ7Z6J8 389 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 TXNDC2Q86VQ3 553 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 PLD6Q8N2A8 252 aaKnown RBP3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 FBXL18Q96ME1 805 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 HEXIM2Q96MH2 286 aaKnown RBP3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 FANCD2OSQ96PS1 177 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 METTL22Q9BUU2 404 aaPredicted RBP3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 NPHS2Q9NP85 383 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 EGFL7Q9UHF1 273 aa3.93□□□□□ -1.78
SNORA40.19-201ENST00000390846 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 RNASE1P07998 156 aaKnown RBP3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 CD8BP10966 210 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 LIG1P18858 919 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 RAB6AP20340 208 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 ASPAP45381 313 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 OXCT1P55809 520 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 RING1Q06587 406 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 MESP2Q0VG99 397 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 CDK5R2Q13319 367 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 GRM2Q14416 872 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 KIF4BQ2VIQ3 1234 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 ZNF792Q3KQV3 632 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 RASIP1Q5U651 963 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 PI16Q6UXB8 463 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 SPOCD1Q6ZMY3 1216 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 DYMQ7RTS9 669 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 LGR6Q9HBX8 967 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 CNTNAP4Q9C0A0 1308 aa3.92□□□□□ -1.78
SNORA40.19-201ENST00000390846 PPP1R15AO75807 674 aaPredicted RBP3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 CYP11A1P05108 521 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 PCSK2P16519 638 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 JUNBP17275 347 aaPredicted RBP3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 FUT4P22083 530 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 FAM181AQ8N9Y4 354 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 EPS8L3Q8TE67 593 aaKnown RBP3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 CCDC74AQ96AQ1 378 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 TNKS2Q9H2K2 1166 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 LRRC4CQ9HCJ2 640 aa3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.91□□□□□ -1.78
SNORA40.19-201ENST00000390846 TMEM238LA0A1B0GVL6 79 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF157P51786 506 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF252P-AS1Q0IIN9 211 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 MAP7Q14244 749 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 RPS26P11Q5JNZ5 115 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF648Q5T619 568 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 TP53INP2Q8IXH6 220 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 C3orf58Q8NDZ4 430 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 FLCNQ8NFG4 579 aa3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 CCDC97Q96F63 343 aaPredicted RBP3.9□□□□□ -1.79
SNORA40.19-201ENST00000390846 EIF1AYO14602 144 aaKnown RBP3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 ABL1P00519 1130 aa3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 KRT1P04264 644 aa3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 FAM87AP0C7U9 286 aa3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZC3H12AQ5D1E8 599 aaKnown RBP3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 NPM2Q86SE8 214 aaKnown RBP3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 DUSP23Q9BVJ7 150 aa3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 ANGEL1Q9UNK9 670 aaKnown RBP3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 DAGLAQ9Y4D2 1042 aa3.89□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF503-AS2A6NEH8 195 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 FAM177BA6PVY3 158 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 BMP6P22004 513 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 DSC3Q14574 896 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 TTLL4Q14679 1199 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF124Q15973 351 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 C1QL4Q86Z23 238 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 LRRN4CLQ8ND94 238 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 ISL2Q96A47 359 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 ALKBH8Q96BT7 664 aaKnown RBP3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 ASIC4Q96FT7 647 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZC3H12CQ9C0D7 883 aaKnown RBP3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 NIF3L1Q9GZT8 377 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 C19orf73Q9NVV2 129 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 AP4E1Q9UPM8 1137 aa3.88□□□□□ -1.79
SNORA40.19-201ENST00000390846 CPNE3O75131 537 aaKnown RBP3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 GSTP1P09211 210 aaKnown RBP3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 ZNF865P0CJ78 1059 aaPredicted RBP3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 NKPD1Q17RQ9 610 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 DUSP27Q5VZP5 1158 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 ATG4DQ86TL0 474 aaPredicted RBP3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 AGBL5Q8NDL9 886 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 GIMAP7Q8NHV1 300 aa3.87□□□□□ -1.79
SNORA40.19-201ENST00000390846 CORO1BQ9BR76 489 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms