RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PIN1Q13526 163 aaPredicted RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 TMEM95Q3KNT9 176 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 INO80DQ53TQ3 878 aaPredicted RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 ZC3H12BQ5HYM0 836 aaKnown RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 FAM102BQ5T8I3 360 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 IER5Q5VY09 327 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 NXNQ6DKJ4 435 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 C6orf15Q6UXA7 325 aaPredicted RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 DTHD1Q6ZMT9 781 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 LSRQ86X29 649 aaPredicted RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 PAF1Q8N7H5 531 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 SPATA9Q9BWV2 254 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 CEP44Q9C0F1 390 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 PPCSQ9HAB8 311 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 JADE2Q9NQC1 790 aa8.16□□□□□ -1.1
TRAV35-201ENST00000390462 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.16□□□□□ -1.1
TRAV35-201ENST00000390462 WDR62O43379 1518 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 CCDC163A0A0D9SF12 145 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 EYA4O95677 639 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 F13A1P00488 732 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 MAN1A1P33908 653 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 VEGFBP49765 207 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 CLN3Q13286 438 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 CWF19L2Q2TBE0 894 aaKnown RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 GFOD2Q3B7J2 385 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 GRAMD1BQ3KR37 738 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 KANK3Q6NY19 840 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 BNC2Q6ZN30 1099 aaPredicted RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 NECAB2Q7Z6G3 386 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 CCDC84Q86UT8 332 aaPredicted RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 PASD1Q8IV76 773 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 TRIM42Q8IWZ5 723 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 REXO1Q8N1G1 1221 aaKnown RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 RHPN1Q8TCX5 695 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 RNF166Q96A37 237 aaPredicted RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 SUSD3Q96L08 255 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 RTFDC1Q9BY42 306 aaPredicted RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 AASDHPPTQ9NRN7 309 aa8.15□□□□□ -1.1
TRAV35-201ENST00000390462 NOB1Q9ULX3 412 aaKnown RBP8.15□□□□□ -1.1
TRAV35-201ENST00000390462 PHLDB1Q86UU1 1377 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 LIG1P18858 919 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 INPP5BP32019 993 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 RPS26P62854 115 aaKnown RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 MTMR1Q13613 665 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 MPP2Q14168 576 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 MAPRE1Q15691 268 aaKnown RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 ACBD5Q5T8D3 534 aaPredicted RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 DGKHQ86XP1 1220 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 MPNDQ8N594 471 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 HOOK2Q96ED9 719 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 CAMKK2Q96RR4 588 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 SMAD5Q99717 465 aaKnown RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 SLC5A4Q9NY91 659 aa8.14□□□□□ -1.11
TRAV35-201ENST00000390462 MRPS23Q9Y3D9 190 aaKnown RBP8.14□□□□□ -1.11
TRAV35-201ENST00000390462 CD2BP2O95400 341 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 IFIT2P09913 472 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 CES1P23141 567 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 CLCQ05315 142 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 ITKQ08881 620 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 MRM1Q6IN84 353 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 GK5Q6ZS86 529 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 DDX46Q7L014 1031 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 STRA8Q7Z7C7 330 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 SPICE1Q8N0Z3 855 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 C19orf47Q8N9M1 422 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 MYRIPQ8NFW9 859 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 CEP63Q96MT8 703 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 KIF2CQ99661 725 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 RUSC1Q9BVN2 902 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 TARS2Q9BW92 718 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 LATS2Q9NRM7 1088 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 ABI2Q9NYB9 513 aaPredicted RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 ANKIB1Q9P2G1 1089 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 TAGLN3Q9UI15 199 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 SCINQ9Y6U3 715 aa8.13□□□□□ -1.11
TRAV35-201ENST00000390462 BAZ1BQ9UIG0 1483 aaKnown RBP8.13□□□□□ -1.11
TRAV35-201ENST00000390462 DNAJC25-GNG10A0A024R161 153 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 CFAP69A5D8W1 941 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 ADCY3O60266 1144 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 F2P00734 622 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 COL6A1P12109 1028 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 EEPD1Q7L9B9 569 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 MAGEB6Q8N7X4 407 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 ZNF280CQ8ND82 737 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 MTMR8Q96EF0 704 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 PAGR1Q9BTK6 254 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms