RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 DEFB123Q8N688 67 aa12.25□□□□□ -0.45
IFT88-203ENST00000389373 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
IFT88-203ENST00000389373 TEKT1Q969V4 418 aa12.25□□□□□ -0.45
IFT88-203ENST00000389373 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
IFT88-203ENST00000389373 ADCY3O60266 1144 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 CYP2C8P10632 490 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 ELNP15502 786 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
IFT88-203ENST00000389373 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 Q7L0L9 218 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
IFT88-203ENST00000389373 ZMYND8Q9ULU4 1186 aaPredicted RBP12.24□□□□□ -0.45
IFT88-203ENST00000389373 C7orf61Q8IZ16 206 aa12.23□□□□□ -0.45
IFT88-203ENST00000389373 PAWRQ96IZ0 340 aaKnown RBP12.23□□□□□ -0.45
IFT88-203ENST00000389373 PARK7Q99497 189 aaKnown RBP12.23□□□□□ -0.45
IFT88-203ENST00000389373 PUS3Q9BZE2 481 aaKnown RBP12.23□□□□□ -0.45
IFT88-203ENST00000389373 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 F6X3S4 739 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 INHAP05111 366 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 FLT3LGP49771 235 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 HDLBPQ00341 1268 aaKnown RBP12.22□□□□□ -0.45
IFT88-203ENST00000389373 TCP10Q12799 353 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
IFT88-203ENST00000389373 ADGRA2Q96PE1 1338 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 BCRP11274 1271 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 SYN1P17600 705 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 BCAMP50895 628 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 CAVIN4Q5BKX8 364 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 GADL1Q6ZQY3 521 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.45
IFT88-203ENST00000389373 KCNH4Q9UQ05 1017 aa12.21□□□□□ -0.45
IFT88-203ENST00000389373 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 TNPO2O14787 897 aaKnown RBP12.2□□□□□ -0.46
IFT88-203ENST00000389373 MOGSQ13724 837 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
IFT88-203ENST00000389373 GPAT2Q6NUI2 795 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 NECAB2Q7Z6G3 386 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 FBXO33Q7Z6M2 555 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
IFT88-203ENST00000389373 GDF15Q99988 308 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 CEP290O15078 2479 aa12.2□□□□□ -0.46
IFT88-203ENST00000389373 BMP8BP34820 402 aa12.19□□□□□ -0.46
IFT88-203ENST00000389373 BEND3Q5T5X7 828 aa12.19□□□□□ -0.46
IFT88-203ENST00000389373 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
IFT88-203ENST00000389373 COL25A1Q9BXS0 654 aaPredicted RBP12.19□□□□□ -0.46
IFT88-203ENST00000389373 GRM8O00222 908 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 CXCL11O14625 94 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
IFT88-203ENST00000389373 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 FKBP1CQ5VVH2 108 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 MTMR10Q9NXD2 777 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 ZNF112Q9UJU3 913 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 ZHX2Q9Y6X8 837 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
IFT88-203ENST00000389373 MAST3O60307 1309 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 MROH5Q6ZUA9 1318 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 CAPN2P17655 700 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 LRRC24Q50LG9 513 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 GPR153Q6NV75 609 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
IFT88-203ENST00000389373 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
IFT88-203ENST00000389373 COA7Q96BR5 231 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 SUCLG2Q96I99 432 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 MRIQ9BWK5 157 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 UBE2OQ9C0C9 1292 aaKnown RBP12.17□□□□□ -0.46
IFT88-203ENST00000389373 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
IFT88-203ENST00000389373 PICK1Q9NRD5 415 aa12.17□□□□□ -0.46
IFT88-203ENST00000389373 MAGEA10P43363 369 aaPredicted RBP12.16□□□□□ -0.46
IFT88-203ENST00000389373 IRF5Q13568 498 aa12.16□□□□□ -0.46
IFT88-203ENST00000389373 NOL9Q5SY16 702 aaKnown RBP12.16□□□□□ -0.46
IFT88-203ENST00000389373 TDHQ8IZJ6 230 aa12.16□□□□□ -0.46
IFT88-203ENST00000389373 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
IFT88-203ENST00000389373 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
IFT88-203ENST00000389373 PAK6Q9NQU5 681 aaPredicted RBP12.16□□□□□ -0.46
IFT88-203ENST00000389373 USP40Q9NVE5 1235 aa12.16□□□□□ -0.46
IFT88-203ENST00000389373 NFIAQ12857 509 aa12.15□□□□□ -0.46
IFT88-203ENST00000389373 LRIT3Q3SXY7 679 aa12.15□□□□□ -0.46
IFT88-203ENST00000389373 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
IFT88-203ENST00000389373 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
IFT88-203ENST00000389373 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
IFT88-203ENST00000389373 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
IFT88-203ENST00000389373 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
IFT88-203ENST00000389373 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 VAMP4O75379 141 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 FAM161BQ96MY7 647 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 SUGT1Q9Y2Z0 365 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms