RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 NXPE3Q969Y0 559 aa3.14□□□□□ -1.91
RNU6-880P-201ENST00000384526 ELP3Q9H9T3 547 aa3.14□□□□□ -1.91
RNU6-880P-201ENST00000384526 AKAP8O43823 692 aaKnown RBP3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 CELA3BP08861 270 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 MAOBP27338 520 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 ZAP70P43403 619 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 NEUROD2Q15784 382 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 ZXDCQ2QGD7 858 aaPredicted RBP3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 ANKMY2Q8IV38 441 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 GPR152Q8TDT2 470 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 CRELD1Q96HD1 420 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 ZKSCAN3Q9BRR0 538 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 XYLT2Q9H1B5 865 aa3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 FNDC3AQ9Y2H6 1198 aaKnown RBP3.13□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L15C9J2P7 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L10C9JJH3 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L13C9JLJ4 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L12C9JPN9 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L11C9JVI0 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L21D6R901 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L18D6R9N7 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L22D6RA61 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L17D6RBQ6 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L19D6RCP7 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L20D6RJB6 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 ECEL1O95672 775 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 SRFP11831 508 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 BRD2P25440 801 aaKnown RBP3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 USP17L24Q0WX57 530 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 PDE12Q6L8Q7 609 aaKnown RBP3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 LARP1Q6PKG0 1096 aaKnown RBP3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 SPACA3Q8IXA5 215 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 C1orf127Q8N9H9 656 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 MARCH10Q8NA82 808 aaPredicted RBP3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 ASB11Q8WXH4 323 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 ARXQ96QS3 562 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 CHRDQ9H2X0 955 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 FAM13BQ9NYF5 915 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 PPP1R9AQ9ULJ8 1098 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 MAFBQ9Y5Q3 323 aaPredicted RBP3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 SNX11Q9Y5W9 270 aa3.12□□□□□ -1.91
RNU6-880P-201ENST00000384526 CES1P23141 567 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 EFEMP1Q12805 493 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 PUM1Q14671 1186 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 ARHGAP27Q6ZUM4 889 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 OSMRQ99650 979 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 WDR18Q9BV38 432 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 DUSP23Q9BVJ7 150 aa3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 BHLHE41Q9C0J9 482 aaPredicted RBP3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU6-880P-201ENST00000384526 FAM196BA6NMK8 535 aa3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 GDNFP39905 211 aa3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 HP1BP3Q5SSJ5 553 aaPredicted RBP3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 C16orf46Q6P387 395 aa3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 ZNF438Q7Z4V0 828 aa3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 HEXIM2Q96MH2 286 aaKnown RBP3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 SLC26A8Q96RN1 970 aa3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 TRIM56Q9BRZ2 755 aaKnown RBP3.1□□□□□ -1.91
RNU6-880P-201ENST00000384526 OTOL1A6NHN0 477 aaPredicted RBP3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 METTL12A8MUP2 240 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 TMPRSS2O15393 492 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 INSRRP14616 1297 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 POU4F3Q15319 338 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 NKPD1Q17RQ9 610 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 ASAP3Q8TDY4 903 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 POM121Q96HA1 1249 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 CARS2Q9HA77 564 aaKnown RBP3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 RAD18Q9NS91 495 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 SEMA3GQ9NS98 782 aa3.09□□□□□ -1.91
RNU6-880P-201ENST00000384526 ZBTB39O15060 712 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 EIF4EBP3O60516 100 aaPredicted RBP3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 AOC2O75106 756 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 CYP11A1P05108 521 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 KANK4Q5T7N3 995 aaPredicted RBP3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 HDGFL1Q5TGJ6 251 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 FAM214BQ7L5A3 538 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 TOP6BLQ8N6T0 577 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 BAHD1Q8TBE0 780 aaPredicted RBP3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 KCNN1Q92952 543 aa3.08□□□□□ -1.92
RNU6-880P-201ENST00000384526 PCDH1Q08174 1060 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 ZNF423Q2M1K9 1284 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 SPATS1Q496A3 300 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 TCERG1LQ5VWI1 586 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 SMYD4Q8IYR2 804 aaPredicted RBP3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 NUDT16Q96DE0 195 aaKnown RBP3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 PIDD1Q9HB75 910 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 MYRFQ9Y2G1 1151 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 SYNGAP1Q96PV0 1343 aa3.07□□□□□ -1.92
RNU6-880P-201ENST00000384526 TNFRSF1AP19438 455 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 CLCN7P51798 805 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 DLG4P78352 724 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 PEAR1Q5VY43 1037 aaPredicted RBP3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 CAPN12Q6ZSI9 719 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 FEZF2Q8TBJ5 459 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 FANCD2OSQ96PS1 177 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 MCOLN1Q9GZU1 580 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 LATS2Q9NRM7 1088 aa3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 TFIP11Q9UBB9 837 aaKnown RBP3.06□□□□□ -1.92
RNU6-880P-201ENST00000384526 MYOCOSA0A1B0GUC4 107 aa3.05□□□□□ -1.92
RNU6-880P-201ENST00000384526 A6NHS1 94 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms