RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CEP85LQ5SZL2 805 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 CTNNBL1Q8WYA6 563 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 PIK3R5Q8WYR1 880 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 PPP1R14BQ96C90 147 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 SASH1O94885 1247 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 ZFXP17010 805 aaPredicted RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 GPR162Q16538 588 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 SARM1Q6SZW1 724 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 DRC1Q96MC2 740 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 DDX23Q9BUQ8 820 aaKnown RBP5.5□□□□□ -1.53
PTPRD-203ENST00000381196 SIL1Q9H173 461 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 KCND1Q9NSA2 647 aa5.5□□□□□ -1.53
PTPRD-203ENST00000381196 CNTRLQ7Z7A1 2325 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 RIMS1Q86UR5 1692 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ICA1Q05084 483 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TAF7Q15545 349 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 DDB1Q16531 1140 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 LARP1BQ659C4 914 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 NAA16Q6N069 864 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CEP57Q86XR8 500 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 OGFOD1Q8N543 542 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SATB2Q9UPW6 733 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 POTEJP0CG39 1038 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ZNF165P49910 485 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ARHGAP27Q6ZUM4 889 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SDCCAG8Q86SQ7 713 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CABP5Q9NP86 173 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC69A6NI79 296 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC96Q2M329 555 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 FNBP4Q8N3X1 1017 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CCDC12Q8WUD4 166 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ERCC6LQ2NKX8 1250 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SEC63Q9UGP8 760 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 PIK3R4Q99570 1358 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 MAN1A1P33908 653 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SLC8A3P57103 927 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 AMPD3Q01432 767 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 DAAM2Q86T65 1068 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 BANK1Q8NDB2 785 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 AIDAQ96BJ3 306 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ABCF2Q9UG63 623 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 MORC2Q9Y6X9 1032 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 MLH3Q9UHC1 1453 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SLC5A1P13866 664 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 BLOC1S2Q6QNY1 142 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 PPP1R42Q7Z4L9 355 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 NUP133Q8WUM0 1156 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 KIF1BPQ96EK5 621 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CDC5LQ99459 802 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 NAP1L4Q99733 375 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 PDRG1Q9NUG6 133 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TFIP11Q9UBB9 837 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 GGA2Q9UJY4 613 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TRIM35Q9UPQ4 493 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 CFAP73A6NFT4 308 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 HLA-DOAP06340 250 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ANXA13P27216 316 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TRAF1Q13077 416 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 IFT20Q8IY31 132 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 OLFM3Q96PB7 478 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ZHX3Q9H4I2 956 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ZNF521Q96K83 1311 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TTC36A6NLP5 189 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 LDHCP07864 332 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 LMAN1P49257 510 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 FAM160A1Q05DH4 1040 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TWISTNBQ3B726 338 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 TMTC1Q8IUR5 882 aa5.49□□□□□ -1.53
PTPRD-203ENST00000381196 ZMAT2Q96NC0 199 aaKnown RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 BMP2KQ9NSY1 1161 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-203ENST00000381196 PTCH1Q13635 1447 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PLEKHG1Q9ULL1 1385 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 FRMD3A2A2Y4 597 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 EIF3CLB5ME19 914 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 NR1H3Q13133 447 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 TESK2Q96S53 571 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SPINK5Q9NQ38 1064 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 LIN7AO14910 233 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 NOL3O60936 208 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PRPF6O94906 941 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 ZNF131P52739 623 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 PHLDB3Q6NSJ2 640 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 TBC1D22AQ8WUA7 517 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 ABCC3O15438 1527 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SLC4A2P04920 1241 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 FKBP4Q02790 459 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 MKRN3Q13064 507 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 POLE3Q9NRF9 147 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA6CA6NDK9 693 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA6BA6NDN3 693 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 IDH1O75874 414 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 GOLGA6DP0CG33 693 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 EIF3BP55884 814 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 RRS1Q15050 365 aaKnown RBP5.48□□□□□ -1.53
PTPRD-203ENST00000381196 RETREG2Q8NC44 543 aa5.48□□□□□ -1.53
PTPRD-203ENST00000381196 EVI5LQ96CN4 794 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms