RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 TSR1Q2NL82 804 aaKnown RBP14.43□□□□□ -0.1
CDX2-201ENST00000381020 UFL1O94874 794 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 DDIT3P35638 169 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 TRIM28Q13263 835 aaKnown RBP14.43□□□□□ -0.1
CDX2-201ENST00000381020 UBE3CQ15386 1083 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 ANKRD2Q9GZV1 360 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 PIK3C2AO00443 1686 aa14.43□□□□□ -0.1
CDX2-201ENST00000381020 AFMP43652 599 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 FAM47AQ5JRC9 791 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 C17orf53Q8N3J3 647 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 MARCH10Q8NA82 808 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 C16orf45Q96MC5 204 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 CABP5Q9NP86 173 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 DLG5Q8TDM6 1919 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 LMOD1P29536 600 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 CCDC194A0A1B0GVG4 234 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 FAM196AQ6ZSG2 479 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
CDX2-201ENST00000381020 CPDO75976 1380 aa14.42□□□□□ -0.1
CDX2-201ENST00000381020 NKX1-1Q15270 411 aaPredicted RBP14.41□□□□□ -0.1
CDX2-201ENST00000381020 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 DIS3L2Q8IYB7 885 aaKnown RBP14.41□□□□□ -0.1
CDX2-201ENST00000381020 RIPOR2Q9Y4F9 1068 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 SMTNL1A8MU46 457 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 LCORLQ8N3X6 602 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 ZNF287Q9HBT7 754 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDX2-201ENST00000381020 ZNF609O15014 1411 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 CYP2D7A0A087X1C5 515 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 DYNLL1P63167 89 aaKnown RBP14.41□□□□□ -0.1
CDX2-201ENST00000381020 FAM160A1Q05DH4 1040 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 BRAPQ7Z569 592 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDX2-201ENST00000381020 KIF5BP33176 963 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 ZNF804AQ7Z570 1209 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 CDK5RAP3Q96JB5 506 aa14.41□□□□□ -0.1
CDX2-201ENST00000381020 ZC3H12CQ9C0D7 883 aaKnown RBP14.41□□□□□ -0.1
CDX2-201ENST00000381020 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 PTGS1P23219 599 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 PPARAQ07869 468 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 MYSM1Q5VVJ2 828 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 TMC6Q7Z403 805 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 CLSTN2Q9H4D0 955 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 CBX8Q9HC52 389 aa14.4□□□□□ -0.1
CDX2-201ENST00000381020 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
CDX2-201ENST00000381020 SFPQP23246 707 aaKnown RBP eCLIP14.39□□□□□ -0.11
CDX2-201ENST00000381020 CCDC96Q2M329 555 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 HEATR3Q7Z4Q2 680 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 FBXO18Q8NFZ0 1043 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 ITPK1Q13572 414 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 APOA5Q6Q788 366 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 CELF1Q92879 486 aaKnown RBP14.39□□□□□ -0.11
CDX2-201ENST00000381020 ZHX3Q9H4I2 956 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 ZSWIM5Q9P217 1185 aa14.39□□□□□ -0.11
CDX2-201ENST00000381020 TRIM75PA6NK02 468 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 EIF5P55010 431 aaKnown RBP14.38□□□□□ -0.11
CDX2-201ENST00000381020 MAPKAPK5Q8IW41 473 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 DHX58Q96C10 678 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 FILIP1LQ4L180 1135 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
CDX2-201ENST00000381020 CLIC4Q9Y696 253 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 BTBD18B2RXH4 712 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 TPM2P07951 284 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
CDX2-201ENST00000381020 STRBPQ96SI9 672 aaKnown RBP14.38□□□□□ -0.11
CDX2-201ENST00000381020 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 ZNF174Q15697 407 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 DACH1Q9UI36 760 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 CASP7P55210 303 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDX2-201ENST00000381020 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 TBC1D10CQ8IV04 446 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 SMARCE1Q969G3 411 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 EIF6P56537 245 aaKnown RBP14.37□□□□□ -0.11
CDX2-201ENST00000381020 GSTO1P78417 241 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 UBE4AQ14139 1066 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 TNKSO95271 1327 aa14.37□□□□□ -0.11
CDX2-201ENST00000381020 ZNF202O95125 648 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 CSF1RP07333 972 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
CDX2-201ENST00000381020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.36□□□□□ -0.11
CDX2-201ENST00000381020 COL9A3Q14050 684 aaPredicted RBP14.36□□□□□ -0.11
CDX2-201ENST00000381020 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 CARMIL3Q8ND23 1372 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 CDHR2Q9BYE9 1310 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 TRIM37O94972 964 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 MCM7P33993 719 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 MED23Q9ULK4 1368 aa14.36□□□□□ -0.11
CDX2-201ENST00000381020 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms