RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 THRAP3Q9Y2W1 955 aaKnown RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 V9GYY5 206 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 SBNO2Q9Y2G9 1366 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 ARHGEF37A1IGU5 675 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 RPS8P62241 208 aaKnown RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TUBB2AQ13885 445 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TICAM2Q86XR7 235 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TUBB2BQ9BVA1 445 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 TPCN1Q9ULQ1 816 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 KIF11P52732 1056 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 GRM1Q13255 1194 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 GPR162Q16538 588 aa8.07□□□□□ -1.12
CCDC171-201ENST00000380701 ESPNB1AK53 854 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 PPIP5K2O43314 1243 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TFCP2Q12800 502 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 OTUD6AQ7L8S5 288 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 FAM200AQ8TCP9 573 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 CCDC113Q9H0I3 377 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 SLC1A4P43007 532 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 ADCY7P51828 1080 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TAF3Q5VWG9 929 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 DCPSQ96C86 337 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TMX3Q96JJ7 454 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 CCDC17Q96LX7 622 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TBC1D32Q96NH3 1257 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 NT5C3AQ9H0P0 336 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 RABGAP1Q9Y3P9 1069 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 ARHGEF35A5YM69 484 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 KIF5AQ12840 1032 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 PRPF4BQ13523 1007 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 NONOQ15233 471 aaKnown RBP eCLIP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 CCDC144CPQ8IYA2 1237 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TXNDC16Q9P2K2 825 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 NOC2LQ9Y3T9 749 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 ANXA1P04083 346 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 GCKRQ14397 625 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 SULF1Q8IWU6 871 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 SMCR8Q8TEV9 937 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 ATP8A2Q9NTI2 1148 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 NPHP4O75161 1426 aaPredicted RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 UBASH3AP57075 661 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TRPC3Q13507 836 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 GOLGA5Q8TBA6 731 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 MTRF1LQ9UGC7 380 aaKnown RBP8.06□□□□□ -1.12
CCDC171-201ENST00000380701 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
CCDC171-201ENST00000380701 A0A1B0GUL7 405 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CHL1O00533 1208 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 RXRBP28702 533 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 FAM193AP78312 1265 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 KRT26Q7Z3Y9 468 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 NSMCE1Q8WV22 266 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 RNF216Q9NWF9 866 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 KDM3AQ9Y4C1 1321 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 SUPT20HL1Q3ZLR7 823 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CNGA4Q8IV77 575 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CCDC42Q96M95 316 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 MRPL11Q9Y3B7 192 aaKnown RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 ELP1O95163 1332 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 PRIM1P49642 420 aaKnown RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 USP14P54578 494 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CREB3L3Q68CJ9 461 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CARD10Q9BWT7 1032 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 LEMD3Q9Y2U8 911 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 F13A1P00488 732 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 RAB3GAP1Q15042 981 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 ARFGAP2Q8N6H7 521 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 ANGEL1Q9UNK9 670 aaKnown RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 WDR17Q8IZU2 1322 aa8.05□□□□□ -1.12
CCDC171-201ENST00000380701 ATF7P17544 494 aaPredicted RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 SNW1Q13573 536 aaKnown RBP8.05□□□□□ -1.12
CCDC171-201ENST00000380701 CETN3O15182 167 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 FOSP01100 380 aaPredicted RBP8.04□□□□□ -1.12
CCDC171-201ENST00000380701 IL13P35225 146 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 KBTBD3Q8NAB2 608 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 NUP58Q9BVL2 599 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 JADE2Q9NQC1 790 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 ATP6V0A2Q9Y487 856 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 XPOTO43592 962 aaKnown RBP8.04□□□□□ -1.12
CCDC171-201ENST00000380701 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 MAIP1Q8WWC4 291 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC171-201ENST00000380701 CTAGE15A4D2H0 777 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 OPA1O60313 960 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 HSF2BPO75031 334 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 CTAGE8P0CG41 777 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 CCT6AP40227 531 aaKnown RBP8.04□□□□□ -1.12
CCDC171-201ENST00000380701 TNNC1P63316 161 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 RUFY3Q7L099 469 aa8.04□□□□□ -1.12
CCDC171-201ENST00000380701 CTAGE6Q86UF2 777 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms