RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 SH2B2O14492 632 aaPredicted RBP14.08□□□□□ -0.16
USP3-202ENST00000380324 ADRA2BP18089 450 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 CCDC183Q5T5S1 534 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 PRR5LQ6MZQ0 368 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 TXNRD3Q86VQ6 643 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 MICU3Q86XE3 530 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 CCDC144CPQ8IYA2 1237 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 CCDC88AQ3V6T2 1871 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 GYS1P13807 737 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 FDPSP14324 419 aaKnown RBP14.08□□□□□ -0.16
USP3-202ENST00000380324 HIBADHP31937 336 aaKnown RBP14.08□□□□□ -0.16
USP3-202ENST00000380324 CEBPZQ03701 1054 aaKnown RBP14.08□□□□□ -0.16
USP3-202ENST00000380324 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.16
USP3-202ENST00000380324 NFXL1Q6ZNB6 911 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 FBXO33Q7Z6M2 555 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 ECM29Q5VYK3 1845 aa14.08□□□□□ -0.16
USP3-202ENST00000380324 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 ZNF384Q8TF68 577 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 MYL10Q9BUA6 226 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 SCAND2PQ9GZW5 306 aaPredicted RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 ELP1O95163 1332 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 MAST2Q6P0Q8 1798 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP3-202ENST00000380324 DYNLL1P63167 89 aaKnown RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 GRAPQ13588 217 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 APOA5Q6Q788 366 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 GRAPLQ8TC17 118 aaPredicted RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 LEO1Q8WVC0 666 aaPredicted RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
USP3-202ENST00000380324 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP3-202ENST00000380324 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
USP3-202ENST00000380324 MYH2Q9UKX2 1941 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 MINDY4BA8MYZ0 360 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 PRDX5P30044 214 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 SLC27A3Q5K4L6 730 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 OTUD7BQ6GQQ9 843 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 ANP32BQ92688 251 aaKnown RBP14.06□□□□□ -0.16
USP3-202ENST00000380324 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
USP3-202ENST00000380324 TSPY26PQ9H489 355 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 ZSWIM5Q9P217 1185 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
USP3-202ENST00000380324 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
USP3-202ENST00000380324 SEMA3EO15041 775 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 PPARAQ07869 468 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 TMEM87BQ96K49 555 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 GPR101Q96P66 508 aaPredicted RBP14.06□□□□□ -0.16
USP3-202ENST00000380324 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 LY9Q9HBG7 655 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 GJB4Q9NTQ9 266 aa14.06□□□□□ -0.16
USP3-202ENST00000380324 ST5P78524 1137 aa14.05□□□□□ -0.16
USP3-202ENST00000380324 MECOMQ03112 1051 aa14.05□□□□□ -0.16
USP3-202ENST00000380324 IGDCC4Q8TDY8 1250 aa14.05□□□□□ -0.16
USP3-202ENST00000380324 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
USP3-202ENST00000380324 KRT23Q9C075 422 aa14.05□□□□□ -0.16
USP3-202ENST00000380324 SERPINB2P05120 415 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 ADD1P35611 737 aaKnown RBP14.04□□□□□ -0.16
USP3-202ENST00000380324 NSUN4Q96CB9 384 aaKnown RBP14.04□□□□□ -0.16
USP3-202ENST00000380324 C8orf76Q96K31 380 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 AATFQ9NY61 560 aaKnown RBP eCLIP14.04□□□□□ -0.16
USP3-202ENST00000380324 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 ZBTB43O43298 467 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 LIG1P18858 919 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 TXNRD1Q16881 649 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
USP3-202ENST00000380324 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 CDC27P30260 824 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 PHKBQ93100 1093 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 DUOX1Q9NRD9 1551 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 DDR1Q08345 913 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
USP3-202ENST00000380324 AIFM3Q96NN9 605 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 SLC12A7Q9Y666 1083 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 LAMB1P07942 1786 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 XDHP47989 1333 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 IRS2Q9Y4H2 1338 aa14.03□□□□□ -0.16
USP3-202ENST00000380324 CCDC173Q0VFZ6 552 aa14.02□□□□□ -0.16
USP3-202ENST00000380324 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.16
USP3-202ENST00000380324 SGMS1Q86VZ5 419 aa14.02□□□□□ -0.16
USP3-202ENST00000380324 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.16
USP3-202ENST00000380324 PGBD1Q96JS3 809 aa14.02□□□□□ -0.16
USP3-202ENST00000380324 USP28Q96RU2 1077 aa14.02□□□□□ -0.16
USP3-202ENST00000380324 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.16
USP3-202ENST00000380324 PDS5AQ29RF7 1337 aaKnown RBP14.02□□□□□ -0.16
USP3-202ENST00000380324 CAMK4Q16566 473 aa14.02□□□□□ -0.17
USP3-202ENST00000380324 PROM2Q8N271 834 aa14.02□□□□□ -0.17
USP3-202ENST00000380324 TRIM44Q96DX7 344 aaPredicted RBP14.02□□□□□ -0.17
USP3-202ENST00000380324 ERICH2A1L162 156 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms