RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 LRRC37A3O60309 1634 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 SYKP43405 635 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 CASP7P55210 303 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 ANTXR2P58335 489 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 IFIT5Q13325 482 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 KLHL10Q6JEL2 608 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 SLC26A6Q9BXS9 759 aa14.34□□□□□ -0.11
PRPF40B-202ENST00000380281 SASH3O75995 380 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 PSEN1P49768 467 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 ANO1Q5XXA6 986 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 NCOA7Q8NI08 942 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 MRFAP1L1Q96HT8 127 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 LLPHQ9BRT6 129 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 MEGF6O75095 1541 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 METAP2P50579 478 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 SRLQ86TD4 932 aa14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 DHX37Q8IY37 1157 aaKnown RBP14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-202ENST00000380281 MROH7-TTC4A0A0A0MT08 1334 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 ZRANB2O95218 330 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 UBASH3AP57075 661 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 EVA1CP58658 441 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 FANCCQ00597 558 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 E4F1Q66K89 784 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 CYB5R4Q7L1T6 521 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 ATG3Q9NT62 314 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 SH3TC1Q8TE82 1336 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 GPS2Q13227 327 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 UBXN4Q92575 508 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 HPS5Q9UPZ3 1129 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 FOXP2O15409 715 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 CDC27P30260 824 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 E2F4Q16254 413 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 KRT40Q6A162 431 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 STAMQ92783 540 aa14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 ALDH8A1Q9H2A2 487 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 BAZ2BQ9UIF8 2168 aaKnown RBP14.32□□□□□ -0.12
PRPF40B-202ENST00000380281 PALLDQ8WX93 1383 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 CASP1P29466 404 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 TBC1D10CQ8IV04 446 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 ZNF274Q96GC6 653 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 GREM2Q9H772 168 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 JRKLQ9Y4A0 524 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 MCAMP43121 646 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 GRIN1Q05586 938 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 PACS2Q86VP3 889 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 NFAT5O94916 1531 aa14.31□□□□□ -0.12
PRPF40B-202ENST00000380281 ADKP55263 362 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 STX17P56962 302 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 SMC1AQ14683 1233 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 HLFQ16534 295 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 CNNM3Q8NE01 707 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 PPP1R13BQ96KQ4 1090 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 MTMR7Q9Y216 660 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 PHKA1P46020 1223 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 DESI2Q9BSY9 194 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 CWC15Q9P013 229 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 PRKAB2O43741 272 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 HSPA2P54652 639 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 TRIM29Q14134 588 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 KARSQ15046 597 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 LONRF3Q496Y0 759 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 TMEM67Q5HYA8 995 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 REXO1L1PQ8IX06 675 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 C19orf44Q9H6X5 657 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
PRPF40B-202ENST00000380281 GOLGA8AA7E2F4 631 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 BTBD18B2RXH4 712 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 ITGA6P23229 1130 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 AIDAQ96BJ3 306 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 MMP14P50281 582 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 MNS1Q8NEH6 495 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 PIH1D3Q9NQM4 214 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 TRMT112Q9UI30 125 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 GOLGB1Q14789 3259 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
PRPF40B-202ENST00000380281 MINDY4BA8MYZ0 360 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms