RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 ZKSCAN5Q9Y2L8 839 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
PDLIM5-204ENST00000380176 BCL9LQ86UU0 1499 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 TYRO3Q06418 890 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 TRDNQ13061 729 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 IFNL3Q8IZI9 196 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 SMARCC1Q92922 1105 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 GOLPH3LQ9H4A5 285 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 CLSTN2Q9H4D0 955 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 KIF3AQ9Y496 699 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 MAP3K12Q12852 859 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 FAM182BQ5T319 152 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 ORC3Q9UBD5 711 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 RTL9Q8NET4 1388 aa9.32□□□□□ -0.92
PDLIM5-204ENST00000380176 ECM29Q5VYK3 1845 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 GSG1L2A8MUP6 293 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 SH2B2O14492 632 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 POLR3DP05423 398 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 RBM43Q6ZSC3 357 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 CCDC144CPQ8IYA2 1237 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 MIGA1Q8NAN2 632 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 NAP1L5Q96NT1 182 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 BCL2L12Q9HB09 334 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 DDX19AQ9NUU7 478 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 ANGEL1Q9UNK9 670 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 PTMAP06454 111 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 CDC27P30260 824 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 GYG1P46976 350 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 TBC1D9BQ66K14 1250 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 ADGRA1Q86SQ6 560 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 STK11IPQ8N1F8 1099 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 IGDCC4Q8TDY8 1250 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 NGLY1Q96IV0 654 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 MYL10Q9BUA6 226 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF652Q9Y2D9 606 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
PDLIM5-204ENST00000380176 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CPLX1O14810 134 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ANO6Q4KMQ2 910 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CLEC4GQ6UXB4 293 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 LUZP1Q86V48 1076 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 FBXO18Q8NFZ0 1043 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 C8orf76Q96K31 380 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 NAPBQ9H115 298 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ZSWIM5Q9P217 1185 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 UBE2Q2LH0YL09 131 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 SMIM22K7EJ46 135 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 DHX16O60231 1041 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF500O60304 480 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 SNW1Q13573 536 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ALX1Q15699 326 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 APOA5Q6Q788 366 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CCDC24Q8N4L8 307 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 SRP68Q9UHB9 627 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF831Q5JPB2 1677 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 COL1A1P02452 1464 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 ZMYM6O95789 1325 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 TOM1O60784 492 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 MICU3Q86XE3 530 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CELF1Q92879 486 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 PHKBQ93100 1093 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 LY9Q9HBG7 655 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 LRP2BPQ9P2M1 347 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 CLIC4Q9Y696 253 aa9.3□□□□□ -0.92
PDLIM5-204ENST00000380176 EP400Q96L91 3159 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 METAP2P50579 478 aaKnown RBP eCLIP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF396Q96N95 335 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 CBX8Q9HC52 389 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 SLC4A4Q9Y6R1 1079 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 BTAF1O14981 1849 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 BAZ2AQ9UIF9 1905 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 A0A087WWV3 80 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ME1P48163 572 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 SF3B3Q15393 1217 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 VPS72Q15906 364 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ANKRD18AQ8IVF6 992 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ENGASEQ8NFI3 743 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ZKSCAN3Q9BRR0 538 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 TTC12Q9H892 705 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 PCDHA7Q9UN72 937 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 MINPP1Q9UNW1 487 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms