RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 LAMB1P07942 1786 aa29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 GORABQ5T7V8 394 aa29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 DZIP1Q86YF9 867 aaKnown RBP29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 IFNL1Q8IU54 200 aa29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 SSH3Q8TE77 659 aa29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 ZNF296Q8WUU4 475 aaPredicted RBP29.39■■■□□ 2.3
CDKN2A-203ENST00000380151 IGF2BP3O00425 579 aaKnown RBP eCLIP29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 ZBTB7BO15156 539 aaPredicted RBP29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 MAP3K9P80192 1104 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 ATP8B2P98198 1209 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 TCP10Q12799 353 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 NFIAQ12857 509 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 PANK1Q8TE04 598 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 CNKSR2Q8WXI2 1034 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 R3HDMLQ9H3Y0 253 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 CSADQ9Y600 493 aa29.38■■■□□ 2.29
CDKN2A-203ENST00000380151 INHBEP58166 350 aa29.37■■■□□ 2.29
CDKN2A-203ENST00000380151 OS9Q13438 667 aaPredicted RBP29.37■■■□□ 2.29
CDKN2A-203ENST00000380151 PI16Q6UXB8 463 aa29.37■■■□□ 2.29
CDKN2A-203ENST00000380151 USP40Q9NVE5 1235 aa29.37■■■□□ 2.29
CDKN2A-203ENST00000380151 GPR25O00155 361 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 ALDH1A1P00352 501 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 CTU1Q7Z7A3 348 aaKnown RBP29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 FAM151AQ8WW52 585 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 WRNIP1Q96S55 665 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 CFHR5Q9BXR6 569 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 HMG20BQ9P0W2 317 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 GAKO14976 1311 aa29.36■■■□□ 2.29
CDKN2A-203ENST00000380151 HOOK2Q96ED9 719 aa29.35■■■□□ 2.29
CDKN2A-203ENST00000380151 MYH2Q9UKX2 1941 aa29.35■■■□□ 2.29
CDKN2A-203ENST00000380151 SURF6O75683 361 aaKnown RBP29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 DCAF15Q66K64 600 aa29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 SPTY2D1Q68D10 685 aaPredicted RBP29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 SPATA5Q8NB90 893 aa29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 OTUD5Q96G74 571 aa29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 FAM198AQ9UFP1 575 aa29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 SNCAIPQ9Y6H5 919 aa29.34■■■□□ 2.29
CDKN2A-203ENST00000380151 ARID4AP29374 1257 aaPredicted RBP29.33■■■□□ 2.29
CDKN2A-203ENST00000380151 NOM1Q5C9Z4 860 aaKnown RBP29.33■■■□□ 2.29
CDKN2A-203ENST00000380151 MIGA2Q7L4E1 593 aa29.33■■■□□ 2.29
CDKN2A-203ENST00000380151 TNNI3KQ59H18 835 aa29.32■■■□□ 2.28
CDKN2A-203ENST00000380151 ERICH6Q7L0X2 663 aa29.32■■■□□ 2.28
CDKN2A-203ENST00000380151 ZKSCAN4Q969J2 545 aaPredicted RBP29.32■■■□□ 2.28
CDKN2A-203ENST00000380151 FPGT-TNNI3KV9GXZ4 949 aa29.32■■■□□ 2.28
CDKN2A-203ENST00000380151 RFX7Q2KHR2 1363 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 MCAMP43121 646 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 MECOMQ03112 1051 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 TBC1D9Q6ZT07 1266 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 SLF2Q8IX21 1173 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 PTPN18Q99952 460 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 ZNF341Q9BYN7 854 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 GPR108Q9NPR9 543 aa29.31■■■□□ 2.28
CDKN2A-203ENST00000380151 MROH7-TTC4A0A0A0MT08 1334 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 TESPA1A2RU30 521 aaPredicted RBP29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 SPDYE5A6NIY4 337 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 BTDP43251 543 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 CEP85Q6P2H3 762 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 ZFPM1Q8IX07 1006 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 MS4A4AQ96JQ5 239 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 DBNDD2Q9BQY9 259 aa29.3■■■□□ 2.28
CDKN2A-203ENST00000380151 FKTNO75072 461 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 UQCRFS1P1P0C7P4 283 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 RGS3P49796 1198 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 OTUD7BQ6GQQ9 843 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 ZNF384Q8TF68 577 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 BRI3BPQ8WY22 251 aa29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 FAM163AQ96GL9 167 aaPredicted RBP29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 NOP58Q9Y2X3 529 aaKnown RBP29.29■■■□□ 2.28
CDKN2A-203ENST00000380151 INPP5BP32019 993 aa29.28■■■□□ 2.28
CDKN2A-203ENST00000380151 IDI2Q9BXS1 227 aa29.28■■■□□ 2.28
CDKN2A-203ENST00000380151 AK9Q5TCS8 1911 aa29.28■■■□□ 2.28
CDKN2A-203ENST00000380151 CCL15-CCL14A0A0B4J2E2 113 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 GTF2A2P52657 109 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 CRHR2Q13324 411 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 CCL15Q16663 113 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 TTC39AQ5SRH9 613 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 ERO1BQ86YB8 467 aa29.27■■■□□ 2.28
CDKN2A-203ENST00000380151 SNRKQ9NRH2 765 aa29.26■■■□□ 2.27
CDKN2A-203ENST00000380151 RAI14Q9P0K7 980 aa29.26■■■□□ 2.27
CDKN2A-203ENST00000380151 DOCK2Q92608 1830 aa29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 ENTPD3O75355 529 aa29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 WDHD1O75717 1129 aaPredicted RBP29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 MS4A1P11836 297 aa29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 NSUN4Q96CB9 384 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 DDX4Q9NQI0 724 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 ATRNL1Q5VV63 1379 aa29.25■■■□□ 2.27
CDKN2A-203ENST00000380151 PICALMQ13492 652 aa29.24■■■□□ 2.27
CDKN2A-203ENST00000380151 CCDC158Q5M9N0 1113 aa29.24■■■□□ 2.27
CDKN2A-203ENST00000380151 TLR7Q9NYK1 1049 aaKnown RBP29.24■■■□□ 2.27
CDKN2A-203ENST00000380151 RCAN3Q9UKA8 241 aa29.24■■■□□ 2.27
CDKN2A-203ENST00000380151 GPR75-ASB3A0A0A6YYF3 556 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 IRF6O14896 467 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 GSTO1P78417 241 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 PPIL2Q13356 520 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 SH3BP5LQ7L8J4 393 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 ZSCAN29Q8IWY8 852 aaPredicted RBP29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 LRP2BPQ9P2M1 347 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 ZNF112Q9UJU3 913 aa29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 DBNLQ9UJU6 430 aaKnown RBP29.23■■■□□ 2.27
CDKN2A-203ENST00000380151 EXOC6BQ9Y2D4 811 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms