RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 DACT1Q9NYF0 836 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 UTYO14607 1347 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 UBR2Q8IWV8 1755 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 PYGLP06737 847 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 TXLNAP40222 546 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 PPP2R3AQ06190 1150 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 ARMCX6Q7L4S7 300 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 C3orf20Q8ND61 904 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 GOLGA6L19H0YKK7 550 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 EBAG9O00559 213 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 PDE6BP35913 854 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 PEX19P40855 299 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 RPUSD2Q8IZ73 545 aaKnown RBP8.56□□□□□ -1.04
CDKL5-201ENST00000379989 STAP2Q9UGK3 403 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
CDKL5-201ENST00000379989 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 TLDC1Q6P9B6 456 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 CCDC102AQ96A19 550 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 UTP14AQ9BVJ6 771 aaKnown RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 ERVV-2B6SEH9 535 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 MAP3K9P80192 1104 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 C11orf57Q6ZUT1 292 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 WDR17Q8IZU2 1322 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 ABCD1P33897 745 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 ACTN3Q08043 901 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 HSP90B2PQ58FF3 399 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 BICD2Q8TD16 824 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 SSH3Q8TE77 659 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 AFAP1L1Q8TED9 768 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 GOLGA1Q92805 767 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 CLSTN2Q9H4D0 955 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 DDX21Q9NR30 783 aaKnown RBP eCLIP8.55□□□□□ -1.04
CDKL5-201ENST00000379989 ANAPC4Q9UJX5 808 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 PCDHGA4Q9Y5G9 962 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 MRFAP1Q9Y605 127 aa8.55□□□□□ -1.04
CDKL5-201ENST00000379989 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 FSBPO95073 299 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 NEFHP12036 1026 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 MAGEA8P43361 318 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 USP5P45974 858 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 SMC3Q9UQE7 1217 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 SHOX2O60902 331 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 UBTFL1P0CB47 393 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 PRPHP41219 470 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 NAP1L1P55209 391 aaKnown RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 NAA25Q14CX7 972 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 ANKZF1Q9H8Y5 726 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 SLC52A2Q9HAB3 445 aa8.54□□□□□ -1.04
CDKL5-201ENST00000379989 CHCHD3Q9NX63 227 aaKnown RBP8.54□□□□□ -1.04
CDKL5-201ENST00000379989 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 RNF40O75150 1001 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 POLA2Q14181 598 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 SPDL1Q96EA4 605 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CRACR2AQ9BSW2 395 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 ABCB6Q9NP58 842 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 MTMR6Q9Y217 621 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 GIGYF1O75420 1035 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 PRPF6O94906 941 aaKnown RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CAVIN2O95810 425 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 PHKG2P15735 406 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CASP8Q14790 479 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 NCAPG2Q86XI2 1143 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CEP112Q8N8E3 955 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 PNKPQ96T60 521 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 KCNB1Q14721 858 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 BRINP3Q76B58 766 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 CCDC150Q8NCX0 1101 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 LINS1Q8NG48 757 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 LRRCC1Q9C099 1032 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 RAB21Q9UL25 225 aa8.53□□□□□ -1.04
CDKL5-201ENST00000379989 COL5A2P05997 1499 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-201ENST00000379989 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 CCP110O43303 1012 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 RCSD1Q6JBY9 416 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 SAAL1Q96ER3 474 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 G3BP2Q9UN86 482 aaKnown RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 DTNBO60941 627 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 PYGBP11216 843 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms