RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TBC1D16Q8TBP0 767 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 ZNF274Q96GC6 653 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-206ENST00000376724 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 NPR1P16066 1061 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-206ENST00000376724 OLFM4Q6UX06 510 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 MFSD6Q6ZSS7 791 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 SP8Q8IXZ3 490 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 GDPD2Q9HCC8 539 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 CD209Q9NNX6 404 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
TRIM40-206ENST00000376724 LDHBP07195 334 aaKnown RBP15.21■□□□□ 0.03
TRIM40-206ENST00000376724 PDCP20941 246 aa15.21■□□□□ 0.03
TRIM40-206ENST00000376724 AKNAD1Q5T1N1 836 aa15.21■□□□□ 0.03
TRIM40-206ENST00000376724 C15orf52Q6ZUT6 534 aaKnown RBP15.21■□□□□ 0.03
TRIM40-206ENST00000376724 FBXL16Q8N461 479 aa15.21■□□□□ 0.03
TRIM40-206ENST00000376724 ZNF622Q969S3 477 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRIM40-206ENST00000376724 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
TRIM40-206ENST00000376724 RIMBP2O15034 1052 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 KDM4AO75164 1064 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 PPARAQ07869 468 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 CDC37L1Q7L3B6 337 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 FAM184AQ8NB25 1140 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.02
TRIM40-206ENST00000376724 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.02
TRIM40-206ENST00000376724 GOLGA8BA8MQT2 603 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 GRIK5Q16478 980 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 FERMT3Q86UX7 667 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
TRIM40-206ENST00000376724 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
TRIM40-206ENST00000376724 NRXN2Q9P2S2 1712 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 PTPDC1A2A3K4 754 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 SMIM22K7EJ46 135 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 FOSBP53539 338 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
TRIM40-206ENST00000376724 MASTLQ96GX5 879 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 LLPHQ9BRT6 129 aaKnown RBP15.19■□□□□ 0.02
TRIM40-206ENST00000376724 CNNM2Q9H8M5 875 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 ANGEL1Q9UNK9 670 aaKnown RBP15.19■□□□□ 0.02
TRIM40-206ENST00000376724 RGPD3A6NKT7 1758 aaPredicted RBP15.19■□□□□ 0.02
TRIM40-206ENST00000376724 RGPD4Q7Z3J3 1758 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 EVCP57679 992 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 DIXDC1Q155Q3 683 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 DEFB132Q7Z7B7 95 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 STAG1Q8WVM7 1258 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 KRT23Q9C075 422 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 SENP2Q9HC62 589 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 ATP6V1DQ9Y5K8 247 aa15.19■□□□□ 0.02
TRIM40-206ENST00000376724 SALL1Q9NSC2 1324 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-206ENST00000376724 IL1R1P14778 569 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 NFXL1Q6ZNB6 911 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 C2CD5Q86YS7 1000 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 MPNDQ8N594 471 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
TRIM40-206ENST00000376724 CRNKL1Q9BZJ0 848 aaKnown RBP15.18■□□□□ 0.02
TRIM40-206ENST00000376724 TMX4Q9H1E5 349 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-206ENST00000376724 H3BQV1 296 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 IFIT3O14879 490 aaKnown RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 RXRAP19793 462 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 HPS5Q9UPZ3 1129 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 CCDC88AQ3V6T2 1871 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 USP17L12C9JPN9 530 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 USP17L21D6R901 530 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 DPP8Q6V1X1 898 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 IGDCC4Q8TDY8 1250 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
TRIM40-206ENST00000376724 PDGFDQ9GZP0 370 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-206ENST00000376724 H0YIN7 160 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CPLX1O14810 134 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 ZBTB22O15209 634 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 BAG6P46379 1132 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
TRIM40-206ENST00000376724 SLC4A8Q2Y0W8 1093 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CCDC144CPQ8IYA2 1237 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 CHD4Q14839 1912 aa15.16■□□□□ 0.02
TRIM40-206ENST00000376724 COL11A2P13942 1736 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms