RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
CLCN6-203ENST00000376490 TMOD2Q9NZR1 351 aa17.55■□□□□ 0.4
CLCN6-203ENST00000376490 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
CLCN6-203ENST00000376490 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
CLCN6-203ENST00000376490 SPTY2D1Q68D10 685 aaPredicted RBP17.54■□□□□ 0.4
CLCN6-203ENST00000376490 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
CLCN6-203ENST00000376490 SLC10A4Q96EP9 437 aa17.54■□□□□ 0.4
CLCN6-203ENST00000376490 CLMNQ96JQ2 1002 aa17.54■□□□□ 0.4
CLCN6-203ENST00000376490 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
CLCN6-203ENST00000376490 USP40Q9NVE5 1235 aa17.54■□□□□ 0.4
CLCN6-203ENST00000376490 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
CLCN6-203ENST00000376490 TTC39AQ5SRH9 613 aa17.53■□□□□ 0.4
CLCN6-203ENST00000376490 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
CLCN6-203ENST00000376490 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
CLCN6-203ENST00000376490 FAM83AQ86UY5 434 aa17.53■□□□□ 0.4
CLCN6-203ENST00000376490 DZIP1Q86YF9 867 aaKnown RBP17.53■□□□□ 0.4
CLCN6-203ENST00000376490 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
CLCN6-203ENST00000376490 IREB2P48200 963 aaKnown RBP17.52■□□□□ 0.4
CLCN6-203ENST00000376490 MECOMQ03112 1051 aa17.52■□□□□ 0.4
CLCN6-203ENST00000376490 ZNF384Q8TF68 577 aa17.52■□□□□ 0.4
CLCN6-203ENST00000376490 RNF186Q9NXI6 227 aa17.52■□□□□ 0.4
CLCN6-203ENST00000376490 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
CLCN6-203ENST00000376490 DBNLQ9UJU6 430 aaKnown RBP17.52■□□□□ 0.4
CLCN6-203ENST00000376490 APBB1O00213 710 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 CA12O43570 354 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 TRPA1O75762 1119 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 TCP10Q12799 353 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 NFIAQ12857 509 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 RHPN1Q8TCX5 695 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
CLCN6-203ENST00000376490 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
CLCN6-203ENST00000376490 GAKO14976 1311 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 HMMRO75330 724 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 HSP90AB4PQ58FF6 505 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 SLF2Q8IX21 1173 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
CLCN6-203ENST00000376490 FAM151AQ8WW52 585 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 LAMB1P07942 1786 aa17.5■□□□□ 0.39
CLCN6-203ENST00000376490 UNCXA6NJT0 531 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 TM4SF4P48230 202 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 AACSQ86V21 672 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 ZFPM1Q8IX07 1006 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 ANKRD13AQ8IZ07 590 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 NSUN4Q96CB9 384 aaKnown RBP17.49■□□□□ 0.39
CLCN6-203ENST00000376490 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
CLCN6-203ENST00000376490 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 FAM198AQ9UFP1 575 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 CDK5RAP2Q96SN8 1893 aa17.49■□□□□ 0.39
CLCN6-203ENST00000376490 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
CLCN6-203ENST00000376490 BTDP43251 543 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 ZAP70P43403 619 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.48■□□□□ 0.39
CLCN6-203ENST00000376490 MIGA2Q7L4E1 593 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 WNK4Q96J92 1243 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 ELP3Q9H9T3 547 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 DOCK2Q92608 1830 aa17.48■□□□□ 0.39
CLCN6-203ENST00000376490 LDHCP07864 332 aa17.47■□□□□ 0.39
CLCN6-203ENST00000376490 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
CLCN6-203ENST00000376490 GJA5P36382 358 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 RGS3P49796 1198 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 GSTO1P78417 241 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.46■□□□□ 0.39
CLCN6-203ENST00000376490 HOOK2Q96ED9 719 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 IDI2Q9BXS1 227 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
CLCN6-203ENST00000376490 NDUFB9Q9Y6M9 179 aa17.46■□□□□ 0.39
CLCN6-203ENST00000376490 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 RPAP1Q9BWH6 1393 aaPredicted RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 WDHD1O75717 1129 aaPredicted RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 ZBTB48P10074 688 aaPredicted RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 RHBDL3P58872 404 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 VGLL4Q14135 290 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 CNKSR2Q8WXI2 1034 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 OPTNQ96CV9 577 aa17.45■□□□□ 0.38
CLCN6-203ENST00000376490 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
CLCN6-203ENST00000376490 ENTPD3O75355 529 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 TBC1D8O95759 1140 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
CLCN6-203ENST00000376490 SREBF2Q12772 1141 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 PICALMQ13492 652 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 SH3BP5LQ7L8J4 393 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 WRNIP1Q96S55 665 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 ZNF341Q9BYN7 854 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 CSADQ9Y600 493 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
CLCN6-203ENST00000376490 MANSC4A6NHS7 340 aaPredicted RBP17.43■□□□□ 0.38
CLCN6-203ENST00000376490 INHBEP58166 350 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms