RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ZNF446Q9NWS9 450 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.57□□□□□ -0.247e-7■□□□□ 11.2
MCF2L-202ENST00000375597 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 TOGARAM2Q6ZUX3 1019 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
MCF2L-202ENST00000375597 FEZ1Q99689 392 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 NAPBQ9H115 298 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 WWC3Q9ULE0 1092 aa13.57□□□□□ -0.24
MCF2L-202ENST00000375597 ZBTB43O43298 467 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 CASQ1P31415 396 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-202ENST00000375597 GSDMDP57764 484 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 CABP5Q9NP86 173 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 TNNT3P45378 269 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-202ENST00000375597 KCTD19Q17RG1 926 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-202ENST00000375597 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 BLZF1Q9H2G9 400 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
MCF2L-202ENST00000375597 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
MCF2L-202ENST00000375597 PHKA1P46020 1223 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 ST5P78524 1137 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 BICDL1Q6ZP65 573 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 GREM2Q9H772 168 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 RGPD8O14715 1765 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-202ENST00000375597 ERBB3P21860 1342 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 UBR1Q8IWV7 1749 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 KIF23Q02241 960 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-202ENST00000375597 TERF2Q15554 542 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 ZNF532Q9HCE3 1301 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 MBD4O95243 580 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 ANTXR2P58335 489 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 MYL5Q02045 173 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
MCF2L-202ENST00000375597 SMIM5Q71RC9 77 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
MCF2L-202ENST00000375597 ARGLU1Q9NWB6 273 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-202ENST00000375597 SOWAHDA6NJG2 315 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
MCF2L-202ENST00000375597 SLFN14P0C7P3 912 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 NLRP12P59046 1061 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 FOXO4P98177 505 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 AKAP17AQ02040 695 aaKnown RBP13.54□□□□□ -0.24
MCF2L-202ENST00000375597 SHC4Q6S5L8 630 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 KCNB2Q92953 911 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 EXOSC10Q01780 885 aaKnown RBP13.54□□□□□ -0.24
MCF2L-202ENST00000375597 KIF4BQ2VIQ3 1234 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 TUBGCP6Q96RT7 1819 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 RANBP6O60518 1105 aaKnown RBP13.54□□□□□ -0.24
MCF2L-202ENST00000375597 ZMYND10O75800 440 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 SDR42E1Q8WUS8 393 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-202ENST00000375597 VPS54Q9P1Q0 977 aa13.54□□□□□ -0.24
MCF2L-202ENST00000375597 ITGA6P23229 1130 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 NYAP1Q6ZVC0 841 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
MCF2L-202ENST00000375597 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-202ENST00000375597 HELLSQ9NRZ9 838 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 RTEL1Q9NZ71 1219 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 LRP2BPQ9P2M1 347 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 MCAMP43121 646 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
MCF2L-202ENST00000375597 ZNF174Q15697 407 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 DRC1Q96MC2 740 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
MCF2L-202ENST00000375597 VPS16Q9H269 839 aa13.53□□□□□ -0.24
MCF2L-202ENST00000375597 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
MCF2L-202ENST00000375597 NEMFO60524 1076 aa13.52□□□□□ -0.24
MCF2L-202ENST00000375597 PNMA6AP0CW24 399 aaPredicted RBP13.52□□□□□ -0.24
MCF2L-202ENST00000375597 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.24
MCF2L-202ENST00000375597 KCNQ4P56696 695 aa13.52□□□□□ -0.24
MCF2L-202ENST00000375597 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.24
MCF2L-202ENST00000375597 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.24
MCF2L-202ENST00000375597 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
MCF2L-202ENST00000375597 RAI14Q9P0K7 980 aa13.52□□□□□ -0.24
MCF2L-202ENST00000375597 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.24
MCF2L-202ENST00000375597 TEX33O43247 280 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 KIF20AO95235 890 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 HLFQ16534 295 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 ZNF569Q5MCW4 686 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
MCF2L-202ENST00000375597 C10orf67Q8IYJ2 551 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms