RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 CSF1RP07333 972 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 CRKP46108 304 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
HLA-DOA-202ENST00000374813 FKBP1CQ5VVH2 108 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 UBE3BQ7Z3V4 1068 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 DIS3LQ8TF46 1054 aaKnown RBP12□□□□□ -0.49
HLA-DOA-202ENST00000374813 COA7Q96BR5 231 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 ZNF341Q9BYN7 854 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 C11orf49Q9H6J7 331 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 ARAP2Q8WZ64 1704 aa12□□□□□ -0.49
HLA-DOA-202ENST00000374813 DOCK3Q8IZD9 2030 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 PI4KAP2A4QPH2 592 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 SNAP23O00161 211 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 CXCL11O14625 94 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 ZNF697Q5TEC3 545 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 PI4KAP1Q8N8J0 262 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
HLA-DOA-202ENST00000374813 NEURL1BA8MQ27 555 aa11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 CYP2C8P10632 490 aa11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 TDRD7Q8NHU6 1098 aaKnown RBP11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 HMX1Q9NP08 348 aaPredicted RBP11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 NCOR1O75376 2440 aa11.98□□□□□ -0.49
HLA-DOA-202ENST00000374813 ELL2O00472 640 aaPredicted RBP11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 IFIT5Q13325 482 aaKnown RBP11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 MOGSQ13724 837 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 MIGA2Q7L4E1 593 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 MAFAQ8NHW3 353 aaPredicted RBP11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 TEKT1Q969V4 418 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 FAM161BQ96MY7 647 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 SLC45A1Q9Y2W3 748 aa11.97□□□□□ -0.49
HLA-DOA-202ENST00000374813 HMGCRP04035 888 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 HIBADHP31937 336 aaKnown RBP11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 INPP5BP32019 993 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 GPAT2Q6NUI2 795 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 SMCR8Q8TEV9 937 aaPredicted RBP11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 FAM122AQ96E09 287 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 CDX2Q99626 313 aaPredicted RBP11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
HLA-DOA-202ENST00000374813 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 PLA2G5P39877 138 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 CACNB3P54284 484 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 GCKRQ14397 625 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 MYH16Q9H6N6 1097 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 OGDHLQ9ULD0 1010 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 AK9Q5TCS8 1911 aa11.95□□□□□ -0.5
HLA-DOA-202ENST00000374813 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 PLIN1O60240 522 aa11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 ZNF853P0CG23 659 aa11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 GNAI1P63096 354 aa11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 UBE4AQ14139 1066 aa11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 NOL9Q5SY16 702 aaKnown RBP11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 LDHAL6AQ6ZMR3 332 aa11.94□□□□□ -0.5
HLA-DOA-202ENST00000374813 A0A0G2JLL6 359 aaPredicted RBP11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 PRRT2Q7Z6L0 340 aaPredicted RBP11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 VPS37DQ86XT2 251 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 FAM84BQ96KN1 310 aaPredicted RBP11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 SEMA6BQ9H3T3 888 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
HLA-DOA-202ENST00000374813 MAST3O60307 1309 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 GYG1P46976 350 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 CASP7P55210 303 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 HHIPL2Q6UWX4 724 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 PICK1Q9NRD5 415 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 CNNM1Q9NRU3 951 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 SUGT1Q9Y2Z0 365 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 ZHX2Q9Y6X8 837 aa11.92□□□□□ -0.5
HLA-DOA-202ENST00000374813 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 FAM110CQ1W6H9 321 aa11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
HLA-DOA-202ENST00000374813 PFASO15067 1338 aa11.9□□□□□ -0.5
HLA-DOA-202ENST00000374813 BDP1A6H8Y1 2624 aa11.9□□□□□ -0.5
HLA-DOA-202ENST00000374813 COL6A1P12109 1028 aa11.9□□□□□ -0.5
HLA-DOA-202ENST00000374813 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms