RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SPTLC3Q9NUV7 552 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 SH2B2O14492 632 aaPredicted RBP19.81■□□□□ 0.76
RXRB-201ENST00000374680 DYNC1I1O14576 645 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 SMC2O95347 1197 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 IARSP41252 1262 aaKnown RBP19.81■□□□□ 0.76
RXRB-201ENST00000374680 MAP3K12Q12852 859 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 CDHR2Q9BYE9 1310 aa19.81■□□□□ 0.76
RXRB-201ENST00000374680 GYG1P46976 350 aa19.8■□□□□ 0.76
RXRB-201ENST00000374680 TERF1P54274 439 aa19.8■□□□□ 0.76
RXRB-201ENST00000374680 CEP57L1Q8IYX8 460 aa19.8■□□□□ 0.76
RXRB-201ENST00000374680 SLC12A7Q9Y666 1083 aa19.8■□□□□ 0.76
RXRB-201ENST00000374680 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
RXRB-201ENST00000374680 USP27XA6NNY8 438 aa19.8■□□□□ 0.76
RXRB-201ENST00000374680 SLC3A2P08195 630 aaKnown RBP19.8■□□□□ 0.76
RXRB-201ENST00000374680 UTP14AQ9BVJ6 771 aaKnown RBP19.8■□□□□ 0.76
RXRB-201ENST00000374680 LAMB4A4D0S4 1761 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 CYP2D7A0A087X1C5 515 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 CCDC69A6NI79 296 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 RANBP6O60518 1105 aaKnown RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 PRDM1O75626 825 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 PFKFB1P16118 471 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 EVCP57679 992 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 ITPK1Q13572 414 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 UBE3CQ15386 1083 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 DDB1Q16531 1140 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 ZNF34Q8IZ26 560 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 TCRBV5S4A2TA0A5A2 114 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 CTAGE5O15320 804 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 LMOD1P29536 600 aaPredicted RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 CHAF1AQ13111 956 aaPredicted RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 NAA30Q147X3 362 aaPredicted RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 NUP188Q5SRE5 1749 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 INTS5Q6P9B9 1019 aaKnown RBP19.79■□□□□ 0.76
RXRB-201ENST00000374680 IGDCC4Q8TDY8 1250 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 RAI14Q9P0K7 980 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 KIAA1468Q9P260 1216 aa19.79■□□□□ 0.76
RXRB-201ENST00000374680 BCL9O00512 1426 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 UQCRFS1P1P0C7P4 283 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 MROH7-TTC4A0A0A0MT08 1334 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 BTBD18B2RXH4 712 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 PATL2C9JE40 543 aaKnown RBP19.78■□□□□ 0.76
RXRB-201ENST00000374680 TNNT1P13805 278 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 GTF2E1P29083 439 aaPredicted RBP19.78■□□□□ 0.76
RXRB-201ENST00000374680 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
RXRB-201ENST00000374680 MFSD6Q6ZSS7 791 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 KCNG4Q8TDN1 519 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 LY9Q9HBG7 655 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 CCDC87Q9NVE4 849 aa19.78■□□□□ 0.76
RXRB-201ENST00000374680 PARP4Q9UKK3 1724 aaKnown RBP19.77■□□□□ 0.76
RXRB-201ENST00000374680 LOC102724428A0A0B4J2F2 783 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 GSG1L2A8MUP6 293 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 IGHMBP2P38935 993 aaKnown RBP19.77■□□□□ 0.76
RXRB-201ENST00000374680 SIK1P57059 783 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 TRIM29Q14134 588 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 TPM3P06753 285 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 CYP7A1P22680 504 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 PNOCQ13519 176 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 PDILTQ8N807 584 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 IFNKQ9P0W0 207 aa19.77■□□□□ 0.76
RXRB-201ENST00000374680 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
RXRB-201ENST00000374680 ZMYM6O95789 1325 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 SKILP12757 684 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 EIF5P55010 431 aaKnown RBP19.76■□□□□ 0.75
RXRB-201ENST00000374680 CHRNDQ07001 517 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 FAM217BQ9NTX9 383 aaPredicted RBP19.76■□□□□ 0.75
RXRB-201ENST00000374680 FGFR2P21802 821 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 ARID4AP29374 1257 aaPredicted RBP19.76■□□□□ 0.75
RXRB-201ENST00000374680 AXDND1Q5T1B0 1012 aaPredicted RBP19.76■□□□□ 0.75
RXRB-201ENST00000374680 ADGRA1Q86SQ6 560 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 TOGARAM1Q9Y4F4 1720 aa19.76■□□□□ 0.75
RXRB-201ENST00000374680 FOXN1O15353 648 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 SYKP43405 635 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 LRRC8AQ8IWT6 810 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 ZNF710Q8N1W2 664 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 POLR3EQ9NVU0 708 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 EVX2Q03828 476 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 BCL2L12Q9HB09 334 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 XIRP1Q702N8 1843 aaKnown RBP19.75■□□□□ 0.75
RXRB-201ENST00000374680 NWD2Q9ULI1 1742 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 ATP1A3P13637 1013 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 GRIN1Q05586 938 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 NR5A1Q13285 461 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 MARCH10Q8NA82 808 aaPredicted RBP19.75■□□□□ 0.75
RXRB-201ENST00000374680 PRIMPOLQ96LW4 560 aa19.75■□□□□ 0.75
RXRB-201ENST00000374680 MROH5Q6ZUA9 1318 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 SSRP1Q08945 709 aaKnown RBP19.74■□□□□ 0.75
RXRB-201ENST00000374680 GOLGA8FQ08AF8 430 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 GOLGA8DPQ0D2H9 430 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 TMC6Q7Z403 805 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 BRAPQ7Z569 592 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 XPO4Q9C0E2 1151 aaKnown RBP19.74■□□□□ 0.75
RXRB-201ENST00000374680 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.74■□□□□ 0.75
RXRB-201ENST00000374680 V9GYY5 206 aaPredicted RBP19.74■□□□□ 0.75
RXRB-201ENST00000374680 BAZ2BQ9UIF8 2168 aaKnown RBP19.74■□□□□ 0.75
RXRB-201ENST00000374680 ERVV-1B6SEH8 477 aa19.74■□□□□ 0.75
RXRB-201ENST00000374680 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms