RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SERPINB2P05120 415 aa23■■□□□ 1.27
HDAC1-201ENST00000373548 TXNRD1Q16881 649 aa23■■□□□ 1.27
HDAC1-201ENST00000373548 RAB11FIP4Q86YS3 637 aa23■■□□□ 1.27
HDAC1-201ENST00000373548 TMEM87BQ96K49 555 aa23■■□□□ 1.27
HDAC1-201ENST00000373548 FOSBP53539 338 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 ELP1O95163 1332 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 TPRNQ4KMQ1 711 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 IGDCC4Q8TDY8 1250 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 SDR42E1Q8WUS8 393 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 STAG1Q8WVM7 1258 aa22.99■■□□□ 1.27
HDAC1-201ENST00000373548 ZSCAN16Q9H4T2 348 aaPredicted RBP22.99■■□□□ 1.27
HDAC1-201ENST00000373548 DHX16O60231 1041 aaKnown RBP22.98■■□□□ 1.27
HDAC1-201ENST00000373548 CRY2Q49AN0 593 aa22.98■■□□□ 1.27
HDAC1-201ENST00000373548 CNNM2Q9H8M5 875 aa22.98■■□□□ 1.27
HDAC1-201ENST00000373548 SENP2Q9HC62 589 aa22.98■■□□□ 1.27
HDAC1-201ENST00000373548 TFIP11Q9UBB9 837 aaKnown RBP22.98■■□□□ 1.27
HDAC1-201ENST00000373548 MAST2Q6P0Q8 1798 aa22.98■■□□□ 1.27
HDAC1-201ENST00000373548 CCDC88AQ3V6T2 1871 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 KDM4AO75164 1064 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
HDAC1-201ENST00000373548 ST5P78524 1137 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 MFSD6Q6ZSS7 791 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 NSUN4Q96CB9 384 aaKnown RBP22.97■■□□□ 1.27
HDAC1-201ENST00000373548 ZSWIM5Q9P217 1185 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 ANKIB1Q9P2G1 1089 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 BAZ2AQ9UIF9 1905 aaKnown RBP22.97■■□□□ 1.27
HDAC1-201ENST00000373548 ZBTB22O15209 634 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 DDR1Q08345 913 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
HDAC1-201ENST00000373548 KRT23Q9C075 422 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 SCAND2PQ9GZW5 306 aaPredicted RBP22.97■■□□□ 1.27
HDAC1-201ENST00000373548 RBSNQ9H1K0 784 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 LEMD3Q9Y2U8 911 aa22.97■■□□□ 1.27
HDAC1-201ENST00000373548 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
HDAC1-201ENST00000373548 MECOMQ03112 1051 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 CHAF1AQ13111 956 aaPredicted RBP22.96■■□□□ 1.27
HDAC1-201ENST00000373548 LY9Q9HBG7 655 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 PPARAQ07869 468 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 CCDC183Q5T5S1 534 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 APOA5Q6Q788 366 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 XDHP47989 1333 aa22.96■■□□□ 1.27
HDAC1-201ENST00000373548 NASPP49321 788 aaPredicted RBP22.95■■□□□ 1.26
HDAC1-201ENST00000373548 TMEM67Q5HYA8 995 aa22.95■■□□□ 1.26
HDAC1-201ENST00000373548 SGMS1Q86VZ5 419 aa22.95■■□□□ 1.26
HDAC1-201ENST00000373548 LEO1Q8WVC0 666 aaPredicted RBP22.95■■□□□ 1.26
HDAC1-201ENST00000373548 SPATA32Q96LK8 384 aa22.95■■□□□ 1.26
HDAC1-201ENST00000373548 CPLX1O14810 134 aa22.94■■□□□ 1.26
HDAC1-201ENST00000373548 PRDX5P30044 214 aa22.94■■□□□ 1.26
HDAC1-201ENST00000373548 POLRMTO00411 1230 aaKnown RBP22.94■■□□□ 1.26
HDAC1-201ENST00000373548 ANAPC4Q9UJX5 808 aa22.94■■□□□ 1.26
HDAC1-201ENST00000373548 IFIT3O14879 490 aaKnown RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 LIFRP42702 1097 aa22.93■■□□□ 1.26
HDAC1-201ENST00000373548 METAP2P50579 478 aaKnown RBP eCLIP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 GUCY1B3Q02153 619 aa22.93■■□□□ 1.26
HDAC1-201ENST00000373548 RRP12Q5JTH9 1297 aaKnown RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 ORC3Q9UBD5 711 aaPredicted RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 ADD1P35611 737 aaKnown RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 ZNF772Q68DY9 489 aaPredicted RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 BRIP1Q9BX63 1249 aa22.93■■□□□ 1.26
HDAC1-201ENST00000373548 RNF41Q9H4P4 317 aaPredicted RBP22.93■■□□□ 1.26
HDAC1-201ENST00000373548 JAG2Q9Y219 1238 aa22.93■■□□□ 1.26
HDAC1-201ENST00000373548 KIAA1551Q9HCM1 1747 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 MINDY4BA8MYZ0 360 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 RXRAP19793 462 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 NFXL1Q6ZNB6 911 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 STK11IPQ8N1F8 1099 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 TOMM22Q9NS69 142 aa22.92■■□□□ 1.26
HDAC1-201ENST00000373548 GPSM2P81274 684 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 MICU3Q86XE3 530 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
HDAC1-201ENST00000373548 SMIM22K7EJ46 135 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 ZBTB43O43298 467 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 CDC27P30260 824 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 ZNF827Q17R98 1081 aa22.91■■□□□ 1.26
HDAC1-201ENST00000373548 C15orf52Q6ZUT6 534 aaKnown RBP22.91■■□□□ 1.26
HDAC1-201ENST00000373548 TDRD7Q8NHU6 1098 aaKnown RBP22.91■■□□□ 1.26
HDAC1-201ENST00000373548 HMGB2P26583 209 aaKnown RBP22.9■■□□□ 1.26
HDAC1-201ENST00000373548 ILDR1Q86SU0 546 aaPredicted RBP22.9■■□□□ 1.26
HDAC1-201ENST00000373548 C8orf76Q96K31 380 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 GPR101Q96P66 508 aaPredicted RBP22.9■■□□□ 1.26
HDAC1-201ENST00000373548 TSPY26PQ9H489 355 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 ECM29Q5VYK3 1845 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 HOXA10P31260 410 aaPredicted RBP22.9■■□□□ 1.26
HDAC1-201ENST00000373548 OTUD7BQ6GQQ9 843 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 GIMAP6Q6P9H5 292 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 MYL10Q9BUA6 226 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 AATFQ9NY61 560 aaKnown RBP eCLIP22.9■■□□□ 1.26
HDAC1-201ENST00000373548 CFAP45Q9UL16 551 aa22.9■■□□□ 1.26
HDAC1-201ENST00000373548 MYH2Q9UKX2 1941 aa22.89■■□□□ 1.26
HDAC1-201ENST00000373548 DUOX1Q9NRD9 1551 aa22.89■■□□□ 1.26
HDAC1-201ENST00000373548 PLSCR1O15162 318 aa22.89■■□□□ 1.25
HDAC1-201ENST00000373548 TMED8Q6PL24 325 aaPredicted RBP22.89■■□□□ 1.25
HDAC1-201ENST00000373548 FBXO18Q8NFZ0 1043 aa22.89■■□□□ 1.25
HDAC1-201ENST00000373548 ZKSCAN3Q9BRR0 538 aa22.89■■□□□ 1.25
HDAC1-201ENST00000373548 MTA3Q9BTC8 594 aa22.89■■□□□ 1.25
HDAC1-201ENST00000373548 FAM217BQ9NTX9 383 aaPredicted RBP22.89■■□□□ 1.25
HDAC1-201ENST00000373548 ANKRD31Q8N7Z5 1873 aa22.89■■□□□ 1.25
HDAC1-201ENST00000373548 CYP2D7A0A087X1C5 515 aa22.88■■□□□ 1.25
HDAC1-201ENST00000373548 KLRG2A4D1S0 409 aaPredicted RBP22.88■■□□□ 1.25
HDAC1-201ENST00000373548 GOLGA8AA7E2F4 631 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms