RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
CSMD2-203ENST00000373377 TOGARAM2Q6ZUX3 1019 aa11.25□□□□□ -0.61
CSMD2-203ENST00000373377 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
CSMD2-203ENST00000373377 SMARCE1Q969G3 411 aa11.25□□□□□ -0.61
CSMD2-203ENST00000373377 ZNF274Q96GC6 653 aaPredicted RBP11.25□□□□□ -0.61
CSMD2-203ENST00000373377 L2HGDHQ9H9P8 463 aa11.25□□□□□ -0.61
CSMD2-203ENST00000373377 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
CSMD2-203ENST00000373377 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
CSMD2-203ENST00000373377 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PHACTR2O75167 634 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 STX17P56962 302 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PPP2R2CQ9Y2T4 447 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 MTF1Q14872 753 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 LONRF3Q496Y0 759 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 CEP126Q9P2H0 1117 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 SASH3O75995 380 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 TFRCP02786 760 aaKnown RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
CSMD2-203ENST00000373377 PPP2R3AQ06190 1150 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 TRIM29Q14134 588 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 WWC2Q6AWC2 1192 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
CSMD2-203ENST00000373377 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CDC27P30260 824 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 METAP2P50579 478 aaKnown RBP eCLIP11.23□□□□□ -0.61
CSMD2-203ENST00000373377 PDE4BQ07343 736 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 SCARF1Q14162 830 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 UTYO14607 1347 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CBFA2T2O43439 604 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 YEATS4O95619 227 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 A1BGP04217 495 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CYP2C19P33261 490 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 ZAP70P43403 619 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CABP4P57796 275 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 CCDC158Q5M9N0 1113 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
CSMD2-203ENST00000373377 KRT40Q6A162 431 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 SHC4Q6S5L8 630 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
CSMD2-203ENST00000373377 B4E1Z4 1266 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 CMA1P23946 247 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 LRRFIP1Q32MZ4 808 aaKnown RBP11.22□□□□□ -0.61
CSMD2-203ENST00000373377 DHX58Q96C10 678 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 SLC26A6Q9BXS9 759 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ARFGAP3Q9NP61 516 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 NFE2L3Q9Y4A8 694 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 A0A0U1RQJ8 604 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 TADA3O75528 432 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 RHOXF2BP0C7M4 288 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 TATP17735 454 aaPredicted RBP11.22□□□□□ -0.61
CSMD2-203ENST00000373377 CCDC102BQ68D86 513 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 RHOXF2Q9BQY4 288 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 PARD6BQ9BYG5 372 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 KCNJ14Q9UNX9 436 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 VWA3AA6NCI4 1184 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 CCP110O43303 1012 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 CHMP4CQ96CF2 233 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.22□□□□□ -0.61
CSMD2-203ENST00000373377 KCNH3Q9ULD8 1083 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
CSMD2-203ENST00000373377 COL22A1Q8NFW1 1626 aaPredicted RBP11.21□□□□□ -0.61
CSMD2-203ENST00000373377 GPAA1O43292 621 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 CAPN2P17655 700 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 CASP1P29466 404 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 AFMP43652 599 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 GRIN1Q05586 938 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 CCDC57Q2TAC2 916 aa11.21□□□□□ -0.61
CSMD2-203ENST00000373377 FOXP4Q8IVH2 680 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms