RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SUGT1Q9Y2Z0 365 aa24.01■■□□□ 1.43
TRAPPC3-204ENST00000373166 MAST3O60307 1309 aa24.01■■□□□ 1.43
TRAPPC3-204ENST00000373166 PDE8BO95263 885 aa24■■□□□ 1.43
TRAPPC3-204ENST00000373166 LRRC24Q50LG9 513 aa24■■□□□ 1.43
TRAPPC3-204ENST00000373166 APOBEC3HQ6NTF7 200 aaKnown RBP24■■□□□ 1.43
TRAPPC3-204ENST00000373166 BICC1Q9H694 974 aaKnown RBP24■■□□□ 1.43
TRAPPC3-204ENST00000373166 PPATQ06203 517 aa23.99■■□□□ 1.43
TRAPPC3-204ENST00000373166 RABL6Q3YEC7 729 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC3-204ENST00000373166 UTYO14607 1347 aa23.99■■□□□ 1.43
TRAPPC3-204ENST00000373166 H0YGN5 161 aa23.98■■□□□ 1.43
TRAPPC3-204ENST00000373166 BCAMP50895 628 aa23.98■■□□□ 1.43
TRAPPC3-204ENST00000373166 ZNF341Q9BYN7 854 aa23.98■■□□□ 1.43
TRAPPC3-204ENST00000373166 HHIPL2Q6UWX4 724 aa23.97■■□□□ 1.43
TRAPPC3-204ENST00000373166 C17orf99Q6UX52 265 aa23.97■■□□□ 1.43
TRAPPC3-204ENST00000373166 VGLL2Q8N8G2 317 aa23.97■■□□□ 1.43
TRAPPC3-204ENST00000373166 ARAP2Q8WZ64 1704 aa23.97■■□□□ 1.43
TRAPPC3-204ENST00000373166 HOXD10P28358 340 aa23.96■■□□□ 1.43
TRAPPC3-204ENST00000373166 MIGA2Q7L4E1 593 aa23.96■■□□□ 1.43
TRAPPC3-204ENST00000373166 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.96■■□□□ 1.43
TRAPPC3-204ENST00000373166 RPAP1Q9BWH6 1393 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 KIF16BQ96L93 1317 aa23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 IFIT1P09914 478 aaKnown RBP23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 PSMC4P43686 418 aa23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 ANKRD23Q86SG2 305 aa23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 CPA4Q9UI42 421 aa23.95■■□□□ 1.42
TRAPPC3-204ENST00000373166 ECM2O94769 699 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 RARSP54136 660 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 PUM3Q15397 648 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 ANKRD44Q8N8A2 993 aa23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 FAM151AQ8WW52 585 aa23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 API5Q9BZZ5 524 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 SRRDQ9UH36 339 aa23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 NOB1Q9ULX3 412 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-204ENST00000373166 PDHXO00330 501 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 FMNL1O95466 1100 aaPredicted RBP23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 INPP5BP32019 993 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 NKX2-3Q8TAU0 364 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 WDR66Q8TBY9 1149 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 RAET1EQ8TD07 263 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 TRIM47Q96LD4 638 aa23.93■■□□□ 1.42
TRAPPC3-204ENST00000373166 ZBED9Q6R2W3 1325 aa23.92■■□□□ 1.42
TRAPPC3-204ENST00000373166 MTFR1Q15390 333 aa23.92■■□□□ 1.42
TRAPPC3-204ENST00000373166 KLHDC4Q8TBB5 520 aa23.92■■□□□ 1.42
TRAPPC3-204ENST00000373166 DPF3Q92784 378 aa23.92■■□□□ 1.42
TRAPPC3-204ENST00000373166 FGFR2P21802 821 aa23.91■■□□□ 1.42
TRAPPC3-204ENST00000373166 OSBPP22059 807 aa23.91■■□□□ 1.42
TRAPPC3-204ENST00000373166 GRK4P32298 578 aa23.91■■□□□ 1.42
TRAPPC3-204ENST00000373166 ZNF112Q9UJU3 913 aa23.91■■□□□ 1.42
TRAPPC3-204ENST00000373166 KCNH4Q9UQ05 1017 aa23.91■■□□□ 1.42
TRAPPC3-204ENST00000373166 CTGFP29279 349 aa23.9■■□□□ 1.42
TRAPPC3-204ENST00000373166 SLC5A1P13866 664 aa23.89■■□□□ 1.41
TRAPPC3-204ENST00000373166 TCP10Q12799 353 aa23.89■■□□□ 1.41
TRAPPC3-204ENST00000373166 CHRDL2Q6WN34 429 aa23.89■■□□□ 1.41
TRAPPC3-204ENST00000373166 SHISA4Q96DD7 197 aa23.89■■□□□ 1.41
TRAPPC3-204ENST00000373166 MYPNQ86TC9 1320 aa23.88■■□□□ 1.41
TRAPPC3-204ENST00000373166 CDC42EP5Q6NZY7 148 aa23.88■■□□□ 1.41
TRAPPC3-204ENST00000373166 LPIN2Q92539 896 aa23.88■■□□□ 1.41
TRAPPC3-204ENST00000373166 PARK7Q99497 189 aaKnown RBP23.88■■□□□ 1.41
TRAPPC3-204ENST00000373166 BIN2Q9UBW5 565 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC3-204ENST00000373166 ADGRA2Q96PE1 1338 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 GJB1P08034 283 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 CCL5P13501 91 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 GJA8P48165 433 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 NOL9Q5SY16 702 aaKnown RBP23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 ARHGAP45Q92619 1136 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 HTATIP2Q9BUP3 242 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 USP44Q9H0E7 712 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 DAGLAQ9Y4D2 1042 aa23.87■■□□□ 1.41
TRAPPC3-204ENST00000373166 EYA2O00167 538 aa23.86■■□□□ 1.41
TRAPPC3-204ENST00000373166 CXCL11O14625 94 aa23.86■■□□□ 1.41
TRAPPC3-204ENST00000373166 UBXN2AP68543 259 aa23.86■■□□□ 1.41
TRAPPC3-204ENST00000373166 MOGSQ13724 837 aa23.86■■□□□ 1.41
TRAPPC3-204ENST00000373166 RNF208Q9H0X6 261 aa23.86■■□□□ 1.41
TRAPPC3-204ENST00000373166 ZSWIM8A7E2V4 1837 aa23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 IPO8O15397 1037 aaKnown RBP23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 FCGRTP55899 365 aa23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 NFIAQ12857 509 aa23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 DIXDC1Q155Q3 683 aa23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 USP40Q9NVE5 1235 aa23.85■■□□□ 1.41
TRAPPC3-204ENST00000373166 RBM27Q9P2N5 1060 aaKnown RBP23.84■■□□□ 1.41
TRAPPC3-204ENST00000373166 FAM198AQ9UFP1 575 aa23.84■■□□□ 1.41
TRAPPC3-204ENST00000373166 SZT2Q5T011 3432 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 CEP290O15078 2479 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 LDHBP07195 334 aaKnown RBP23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 UBTFL1P0CB47 393 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 BCRP11274 1271 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 PRDX5P30044 214 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 PRKCZQ05513 592 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 UBE2Q1Q7Z7E8 422 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 SLAIN1Q8ND83 568 aa23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 FRAT1Q92837 279 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 GNL3LQ9NVN8 582 aaKnown RBP23.83■■□□□ 1.41
TRAPPC3-204ENST00000373166 BCAR3O75815 825 aa23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 CYP2C8P10632 490 aa23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 GPAT2Q6NUI2 795 aa23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 FASTKD5Q7L8L6 764 aaKnown RBP23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 PICK1Q9NRD5 415 aa23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 NR2E3Q9Y5X4 410 aa23.82■■□□□ 1.4
TRAPPC3-204ENST00000373166 RFX5P48382 616 aaPredicted RBP23.81■■□□□ 1.4
TRAPPC3-204ENST00000373166 HDAC5Q9UQL6 1122 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms