RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 ITFG2Q969R8 447 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 NMRK2Q9NPI5 230 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDR1-201ENST00000370532 TSPYL4Q9UJ04 414 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 RRP15Q9Y3B9 282 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 V9GYY5 206 aaPredicted RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 CNTNAP1P78357 1384 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 ELL2O00472 640 aaPredicted RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 IPO8O15397 1037 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 VAMP4O75379 141 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 BCAR3O75815 825 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 BBOX1O75936 387 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 IARSP41252 1262 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 RARSP54136 660 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 SETQ01105 290 aaPredicted RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 USP50Q70EL3 339 aaPredicted RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 ZNF397Q8NF99 534 aaPredicted RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 SNX21Q969T3 373 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 DEF6Q9H4E7 631 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 EXOC6BQ9Y2D4 811 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 PCDHGA10Q9Y5H3 936 aa5.26□□□□□ -1.57
CDR1-201ENST00000370532 LRRFIP2Q9Y608 721 aaKnown RBP5.26□□□□□ -1.57
CDR1-201ENST00000370532 NBPF26B4DH59 902 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 CA12O43570 354 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 PRPF40AO75400 957 aaKnown RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 MAP2K2P36507 400 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 SSR1P43307 286 aaKnown RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 PTGDRQ13258 359 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 PKP1Q13835 747 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 ZSCAN26Q16670 478 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 TWISTNBQ3B726 338 aaPredicted RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 NBPF15Q8N660 670 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 TSPYL6Q8N831 410 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 C8orf58Q8NAV2 365 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 SMARCE1Q969G3 411 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 TMX4Q9H1E5 349 aaPredicted RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 RRAGCQ9HB90 399 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 PGAP2Q9UHJ9 254 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 USP25Q9UHP3 1055 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 HACL1Q9UJ83 578 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 RTL9Q8NET4 1388 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 RASSF10A6NK89 507 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 POTECB2RU33 542 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 ERFEQ4G0M1 354 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 SWT1Q5T5J6 900 aaKnown RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 SP8Q8IXZ3 490 aa5.25□□□□□ -1.57
CDR1-201ENST00000370532 RBM28Q9NW13 759 aaKnown RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 BSDC1Q9NW68 430 aaPredicted RBP5.25□□□□□ -1.57
CDR1-201ENST00000370532 NIP7Q9Y221 180 aaKnown RBP eCLIP5.25□□□□□ -1.57
CDR1-201ENST00000370532 ADCY5O95622 1261 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 NTSR2O95665 410 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 A1BGP04217 495 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 RPS12P25398 132 aaKnown RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 EIF6P56537 245 aaKnown RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 RASSF7Q02833 373 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 ALDH1L2Q3SY69 923 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 MCTP2Q6DN12 878 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 TXLNBQ8N3L3 684 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 GOLGA6L1Q8N7Z2 621 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 ANKRD20A12PQ8NF67 263 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 TAF1DQ9H5J8 278 aaPredicted RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 DDX21Q9NR30 783 aaKnown RBP eCLIP5.24□□□□□ -1.57
CDR1-201ENST00000370532 USP16Q9Y5T5 823 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 MRVI1Q9Y6F6 885 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 PTPRCP08575 1304 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 SMTNL1A8MU46 457 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 POLR3GO15318 223 aaPredicted RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 ECE1P42892 770 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 PLA2G4AP47712 749 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 PRELPP51888 382 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 KRT24Q2M2I5 525 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 C1QTNF12Q5T7M4 302 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 NAIF1Q69YI7 327 aaPredicted RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 SUGP1Q8IWZ8 645 aaKnown RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 FAM184AQ8NB25 1140 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 SSH1Q8WYL5 1049 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 RPGRQ92834 1020 aaKnown RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 UTP14AQ9BVJ6 771 aaKnown RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 BCL2L13Q9BXK5 485 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 TBC1D2BQ9UPU7 963 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 ATP6V0A2Q9Y487 856 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 MYH3P11055 1940 aa5.24□□□□□ -1.57
CDR1-201ENST00000370532 COL1A1P02452 1464 aaPredicted RBP5.24□□□□□ -1.57
CDR1-201ENST00000370532 TMEM88BA6NKF7 163 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 CAND2O75155 1236 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 NUDT7P0C024 238 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 SF3B3Q15393 1217 aaKnown RBP5.23□□□□□ -1.57
CDR1-201ENST00000370532 SMIM5Q71RC9 77 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 SYNE4Q8N205 404 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 PTCD2Q8WV60 388 aaKnown RBP5.23□□□□□ -1.57
CDR1-201ENST00000370532 JDP2Q8WYK2 163 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 CLUAP1Q96AJ1 413 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 FAXDC2Q96IV6 333 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 C16orf45Q96MC5 204 aaPredicted RBP5.23□□□□□ -1.57
CDR1-201ENST00000370532 NLRP3Q96P20 1036 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 TSPY26PQ9H489 355 aa5.23□□□□□ -1.57
CDR1-201ENST00000370532 HYPKQ9NX55 129 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms