RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 EPB41P11171 864 aaKnown RBP12.69□□□□□ -0.38
PDCD11-201ENST00000369797 HSPA4P34932 840 aa12.69□□□□□ -0.38
PDCD11-201ENST00000369797 GAS8O95995 478 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 ARFGAP3Q9NP61 516 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 ATP2A2P16615 1042 aaKnown RBP12.68□□□□□ -0.38
PDCD11-201ENST00000369797 GEN1Q17RS7 908 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 ZNF594Q96JF6 807 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-201ENST00000369797 IFT74Q96LB3 600 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDCD11-201ENST00000369797 A0A1B0GUL7 405 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 USH1GQ495M9 461 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 ZNF569Q5MCW4 686 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 PIK3AP1Q6ZUJ8 805 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 TIGD1Q96MW7 591 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 NACA2Q9H009 215 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 CALCOCO1Q9P1Z2 691 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 CPA1P15085 419 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 STRN3Q13033 797 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 SPOUT1Q5T280 376 aaKnown RBP12.68□□□□□ -0.38
PDCD11-201ENST00000369797 DAPK3O43293 454 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 HOXC9P31274 260 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 TYRO3Q06418 890 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 INF2Q27J81 1249 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 NCAPH2Q6IBW4 605 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 STMN4Q9H169 189 aaPredicted RBP12.68□□□□□ -0.38
PDCD11-201ENST00000369797 IFNKQ9P0W0 207 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
PDCD11-201ENST00000369797 E7EVH7 732 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 TXKP42681 527 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
PDCD11-201ENST00000369797 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 LUC7L2Q9Y383 392 aaKnown RBP12.67□□□□□ -0.38
PDCD11-201ENST00000369797 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 MRRFQ96E11 262 aaKnown RBP12.67□□□□□ -0.38
PDCD11-201ENST00000369797 SH3TC1Q8TE82 1336 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 KCNA6P17658 529 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 TPD52P55327 224 aaPredicted RBP12.67□□□□□ -0.38
PDCD11-201ENST00000369797 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
PDCD11-201ENST00000369797 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 GOLGA1Q92805 767 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 CCDC160A6NGH7 325 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 PDE4DQ08499 809 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 SEL1L2Q5TEA6 688 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
PDCD11-201ENST00000369797 BIRC2Q13490 618 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
PDCD11-201ENST00000369797 PFDN4Q9NQP4 134 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 ARHGEF35A5YM69 484 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 SPOPO43791 374 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 OPA1O60313 960 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 CRCPO75575 148 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 RHOXF2BP0C7M4 288 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 RHOXF2Q9BQY4 288 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 FAM204AQ9H8W3 233 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 KIFAP3Q92845 792 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
PDCD11-201ENST00000369797 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 V9GY48 417 aaPredicted RBP12.66□□□□□ -0.38
PDCD11-201ENST00000369797 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 TNFAIP3P21580 790 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
PDCD11-201ENST00000369797 PARP10Q53GL7 1025 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 CCT6BQ92526 530 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
PDCD11-201ENST00000369797 GABPAQ06546 454 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 MTRF1LQ9UGC7 380 aaKnown RBP12.65□□□□□ -0.38
PDCD11-201ENST00000369797 ZWINTO95229 277 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 APBA3O96018 575 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 EYA2O00167 538 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 ZBED4O75132 1171 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 SLC1A4P43007 532 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 TTC14Q96N46 770 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 A1BGP04217 495 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDCD11-201ENST00000369797 IP6K1Q92551 441 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 PKNOX2Q96KN3 472 aa12.65□□□□□ -0.38
PDCD11-201ENST00000369797 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDCD11-201ENST00000369797 PDE8AO60658 829 aa12.65□□□□□ -0.39
PDCD11-201ENST00000369797 VAMP4O75379 141 aa12.65□□□□□ -0.39
PDCD11-201ENST00000369797 ERCC3P19447 782 aa12.65□□□□□ -0.39
PDCD11-201ENST00000369797 RNASE9P60153 205 aaKnown RBP12.65□□□□□ -0.39
PDCD11-201ENST00000369797 HELLSQ9NRZ9 838 aa12.65□□□□□ -0.39
PDCD11-201ENST00000369797 KRT19P08727 400 aa12.64□□□□□ -0.39
PDCD11-201ENST00000369797 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
PDCD11-201ENST00000369797 ZEB2O60315 1214 aa12.64□□□□□ -0.39
PDCD11-201ENST00000369797 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
PDCD11-201ENST00000369797 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms