RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 ZNF589Q86UQ0 364 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-202ENST00000369598 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 LRRC2Q9BYS8 371 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 URI1O94763 535 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-202ENST00000369598 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
PHTF1-202ENST00000369598 RFX7Q2KHR2 1363 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 CHGBP05060 677 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 LMAN1P49257 510 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 HSP90AA4PQ58FG1 418 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 AOPEPQ8N6M6 819 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 VGLL2Q8N8G2 317 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 RIC1Q4ADV7 1423 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 TULP2O00295 520 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 RFC4P35249 363 aa17.61■□□□□ 0.41
PHTF1-202ENST00000369598 SEC62Q99442 399 aaKnown RBP17.61■□□□□ 0.41
PHTF1-202ENST00000369598 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.61■□□□□ 0.41
PHTF1-202ENST00000369598 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
PHTF1-202ENST00000369598 TAF5LO75529 589 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
PHTF1-202ENST00000369598 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 CREB3L3Q68CJ9 461 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 UBXN4Q92575 508 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 MED23Q9ULK4 1368 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 SBF2Q86WG5 1849 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
PHTF1-202ENST00000369598 TMCO3Q6UWJ1 677 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 LPIN2Q92539 896 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 PLEKHA4Q9H4M7 779 aa17.6■□□□□ 0.41
PHTF1-202ENST00000369598 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
PHTF1-202ENST00000369598 TRIM37O94972 964 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 CCZ1BP86790 482 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
PHTF1-202ENST00000369598 SCARF1Q14162 830 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 CCDC129Q6ZRS4 1044 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 TMC6Q7Z403 805 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 AMIGO3Q86WK7 504 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 MNS1Q8NEH6 495 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 CDC5LQ99459 802 aaKnown RBP17.59■□□□□ 0.41
PHTF1-202ENST00000369598 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
PHTF1-202ENST00000369598 RNF113AO15541 343 aaKnown RBP17.58■□□□□ 0.41
PHTF1-202ENST00000369598 ZAP70P43403 619 aa17.58■□□□□ 0.41
PHTF1-202ENST00000369598 SYCP1Q15431 976 aa17.58■□□□□ 0.41
PHTF1-202ENST00000369598 NYAP1Q6ZVC0 841 aa17.58■□□□□ 0.41
PHTF1-202ENST00000369598 GPATCH11Q8N954 259 aa17.58■□□□□ 0.41
PHTF1-202ENST00000369598 BCORQ6W2J9 1755 aa17.58■□□□□ 0.41
PHTF1-202ENST00000369598 SLC27A2O14975 620 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 OAS2P29728 719 aaKnown RBP17.58■□□□□ 0.4
PHTF1-202ENST00000369598 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 KCNB2Q92953 911 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 CARD6Q9BX69 1037 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 LOC102724159A0A0B4J2E5 919 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 SLC5A1P13866 664 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 PWP2Q15269 919 aaKnown RBP17.58■□□□□ 0.4
PHTF1-202ENST00000369598 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.4
PHTF1-202ENST00000369598 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
PHTF1-202ENST00000369598 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
PHTF1-202ENST00000369598 ZSCAN26Q16670 478 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 CLSTN2Q9H4D0 955 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 H3BQV1 296 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 ZMYM1Q5SVZ6 1142 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 TEX35Q5T0J7 233 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 PI16Q6UXB8 463 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
PHTF1-202ENST00000369598 MYO1CO00159 1063 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 E4F1Q66K89 784 aaPredicted RBP17.56■□□□□ 0.4
PHTF1-202ENST00000369598 ZNF512BQ96KM6 892 aaPredicted RBP17.56■□□□□ 0.4
PHTF1-202ENST00000369598 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 RASSF4Q9H2L5 321 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 DDX60Q8IY21 1712 aaKnown RBP17.56■□□□□ 0.4
PHTF1-202ENST00000369598 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 FGFR2P21802 821 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 MCAMP43121 646 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
PHTF1-202ENST00000369598 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 LY75O60449 1722 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 SNAP23O00161 211 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 PHACTR2O75167 634 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 UQCRFS1P1P0C7P4 283 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 PSMA5P28066 241 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
PHTF1-202ENST00000369598 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
PHTF1-202ENST00000369598 SASH3O75995 380 aa17.55■□□□□ 0.4
PHTF1-202ENST00000369598 ZFYP08048 801 aaPredicted RBP17.55■□□□□ 0.4
PHTF1-202ENST00000369598 PHKA1P46020 1223 aa17.55■□□□□ 0.4
PHTF1-202ENST00000369598 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
PHTF1-202ENST00000369598 HMG20BQ9P0W2 317 aa17.55■□□□□ 0.4
PHTF1-202ENST00000369598 CHRNDQ07001 517 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms