RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CCL15-CCL14A0A0B4J2E2 113 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 RGS3P49796 1198 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 GTF2A2P52657 109 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 MTFR1Q15390 333 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 CCL15Q16663 113 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 FAM43AQ8N2R8 423 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 VEZTQ9HBM0 779 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
CSNK1E-202ENST00000366216 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 CTGFP29279 349 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 PRMT2P55345 433 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
CSNK1E-202ENST00000366216 F8W031 263 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 TLR2O60603 784 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 PDE4AP27815 886 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 GJA8P48165 433 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 RASA3Q14644 834 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 CFAP100Q494V2 611 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 UTYO14607 1347 aa13.83□□□□□ -0.2
CSNK1E-202ENST00000366216 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
CSNK1E-202ENST00000366216 CASP7P55210 303 aa13.82□□□□□ -0.2
CSNK1E-202ENST00000366216 VGLL4Q14135 290 aa13.82□□□□□ -0.2
CSNK1E-202ENST00000366216 TEPSINQ96N21 525 aa13.82□□□□□ -0.2
CSNK1E-202ENST00000366216 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
CSNK1E-202ENST00000366216 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 H7C1W4 665 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 GJB1P08034 283 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 CCL5P13501 91 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 ANKRD45Q5TZF3 282 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 ANKRD2Q9GZV1 360 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 ZCCHC17Q9NP64 241 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 PTPRFP10586 1907 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
CSNK1E-202ENST00000366216 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 GRM8O00222 908 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 TAF5LO75529 589 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 FARP2O94887 1054 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 GRK4P32298 578 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 CHRNDQ07001 517 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 POLA2Q14181 598 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 GPR153Q6NV75 609 aa13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-202ENST00000366216 EVI5O60447 810 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 CETPP11597 493 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 ITGA6P23229 1130 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 IGHMBP2P38935 993 aaKnown RBP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 KCNJ4P48050 445 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 RBM5P52756 815 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 MTX1Q13505 466 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 DEFB123Q8N688 67 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 RAET1EQ8TD07 263 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 SSH3Q8TE77 659 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 RNF208Q9H0X6 261 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 SRRDQ9UH36 339 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 RIPOR2Q9Y4F9 1068 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 CSADQ9Y600 493 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 VCANP13611 3396 aa13.79□□□□□ -0.2
CSNK1E-202ENST00000366216 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 BTBD19C9JJ37 291 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 CSF1RP07333 972 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 MAP3K9P80192 1104 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 GCKRQ14397 625 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 GRIK5Q16478 980 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 C15orf52Q6ZUT6 534 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
CSNK1E-202ENST00000366216 IL1R1P14778 569 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 OSBPP22059 807 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 HOXD10P28358 340 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 PSMC4P43686 418 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
CSNK1E-202ENST00000366216 MYPNQ86TC9 1320 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms