RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 KIAA1468Q9P260 1216 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 SAMM50Q9Y512 469 aa13.14□□□□□ -0.31
CNOT4-203ENST00000361528 OPA1O60313 960 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 SKAP2O75563 359 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 SMNDC1O75940 238 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 TBX2Q13207 712 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 SNX1Q13596 522 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 FAM228AQ86W67 206 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 EBF2Q9HAK2 575 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 FERP16591 822 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 HHATQ5VTY9 493 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 ZFAND2BQ8WV99 257 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
CNOT4-203ENST00000361528 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
CNOT4-203ENST00000361528 GOLGA6BA6NDN3 693 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 ALS2CR12Q96Q35 445 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 IL25Q9H293 177 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 SLC12A5Q9H2X9 1139 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 KDM4CQ9H3R0 1056 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 MYO1AQ9UBC5 1043 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
CNOT4-203ENST00000361528 ENO4A6NNW6 628 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 AGPSO00116 658 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 PDLIM1O00151 329 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 PDHBP11177 359 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 USP14P54578 494 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 TOGARAM2Q6ZUX3 1019 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 BZW1Q7L1Q6 419 aaKnown RBP13.12□□□□□ -0.31
CNOT4-203ENST00000361528 P3H4Q92791 437 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
CNOT4-203ENST00000361528 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 LMCD1Q9NZU5 365 aa13.12□□□□□ -0.31
CNOT4-203ENST00000361528 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 BIN1O00499 593 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 SERPINC1P01008 464 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 PSMA5P28066 241 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 NECAB1Q8N987 351 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 SCLT1Q96NL6 688 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 PLEKHG4BQ96PX9 1271 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 EPN3Q9H201 632 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 PLEKHD1A6NEE1 506 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 MGRN1O60291 552 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 FAM81AQ8TBF8 368 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 RUBCNQ92622 972 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 MEIS3Q99687 375 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
CNOT4-203ENST00000361528 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
CNOT4-203ENST00000361528 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 A0A1W2PQ27 194 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 A0A1W2PQ64 194 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 A0A1W2PQD8 194 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 DTNBP1Q96EV8 351 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
CNOT4-203ENST00000361528 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
CNOT4-203ENST00000361528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms