RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
HPS1-204ENST00000361490 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 ZNF444Q8N0Y2 327 aaPredicted RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 NLGN1Q8N2Q7 840 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.24
HPS1-204ENST00000361490 STK32BQ9NY57 414 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 BAG3O95817 575 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 SDF4Q9BRK5 362 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 ZSWIM5Q9P217 1185 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 COL23A1Q86Y22 540 aaPredicted RBP13.58□□□□□ -0.24
HPS1-204ENST00000361490 ESR2Q92731 530 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
HPS1-204ENST00000361490 CYP2D6P10635 497 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 CHRNA5P30532 468 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 GPSM2P81274 684 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 PPARAQ07869 468 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 EZH2Q15910 746 aaKnown RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 SPTY2D1Q68D10 685 aaPredicted RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 IFIT1BQ5T764 474 aaKnown RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 DRC7Q8IY82 874 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 FGFR2P21802 821 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
HPS1-204ENST00000361490 MRE11P49959 708 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 TCP10Q12799 353 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 CYB5R4Q7L1T6 521 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 MXD3Q9BW11 206 aa13.57□□□□□ -0.24
HPS1-204ENST00000361490 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
HPS1-204ENST00000361490 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 KRT23Q9C075 422 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 XDHP47989 1333 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
HPS1-204ENST00000361490 GAS2L3Q86XJ1 694 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 NEDD4P46934 1319 aa13.56□□□□□ -0.24
HPS1-204ENST00000361490 H0YIN7 160 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 DYNLL2Q96FJ2 89 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 LRP6O75581 1613 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 GSG1L2A8MUP6 293 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 GNAT2P19087 354 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 RTN1Q16799 776 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
HPS1-204ENST00000361490 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
HPS1-204ENST00000361490 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
HPS1-204ENST00000361490 PDE4BQ07343 736 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
HPS1-204ENST00000361490 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
HPS1-204ENST00000361490 LDHCP07864 332 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 DDR1Q08345 913 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 CREBRFQ8IUR6 639 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 ERCC4Q92889 916 aaPredicted RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 NMT2O60551 498 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 EPB41L4AQ9HCS5 686 aaPredicted RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 CDKL5O76039 1030 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 TTF2Q9UNY4 1162 aaKnown RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 ABCC6O95255 1503 aa13.54□□□□□ -0.24
HPS1-204ENST00000361490 AHDC1Q5TGY3 1603 aaPredicted RBP13.54□□□□□ -0.24
HPS1-204ENST00000361490 CACNB3P54284 484 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
HPS1-204ENST00000361490 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
HPS1-204ENST00000361490 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
HPS1-204ENST00000361490 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
HPS1-204ENST00000361490 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
HPS1-204ENST00000361490 DACT1Q9NYF0 836 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 PROM2Q8N271 834 aa13.53□□□□□ -0.24
HPS1-204ENST00000361490 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms