RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
CCL28-201ENST00000361115 TMPOP42166 694 aaKnown RBP9.2□□□□□ -0.94
CCL28-201ENST00000361115 IREB2P48200 963 aaKnown RBP9.2□□□□□ -0.94
CCL28-201ENST00000361115 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
CCL28-201ENST00000361115 PDCL2Q8N4E4 241 aa9.2□□□□□ -0.94
CCL28-201ENST00000361115 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
CCL28-201ENST00000361115 MRIQ9BWK5 157 aa9.2□□□□□ -0.94
CCL28-201ENST00000361115 HDLBPQ00341 1268 aaKnown RBP9.19□□□□□ -0.94
CCL28-201ENST00000361115 SCARF1Q14162 830 aa9.19□□□□□ -0.94
CCL28-201ENST00000361115 ZNF296Q8WUU4 475 aaPredicted RBP9.19□□□□□ -0.94
CCL28-201ENST00000361115 HTATIP2Q9BUP3 242 aa9.19□□□□□ -0.94
CCL28-201ENST00000361115 BSDC1Q9NW68 430 aaPredicted RBP9.19□□□□□ -0.94
CCL28-201ENST00000361115 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
CCL28-201ENST00000361115 MNX1P50219 401 aaPredicted RBP9.19□□□□□ -0.94
CCL28-201ENST00000361115 MCM10Q7L590 875 aa9.19□□□□□ -0.94
CCL28-201ENST00000361115 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
CCL28-201ENST00000361115 SCN9AQ15858 1988 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 MYO1BO43795 1136 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 TRPA1O75762 1119 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 FKBP5Q13451 457 aaPredicted RBP9.18□□□□□ -0.94
CCL28-201ENST00000361115 FKBP1CQ5VVH2 108 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
CCL28-201ENST00000361115 MBD3O95983 291 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 HOXD10P28358 340 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 GPSM2P81274 684 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 ANKRD18AQ8IVF6 992 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 SPTLC3Q9NUV7 552 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 VGLL3A8MV65 326 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 RAD17O75943 681 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 KIF22Q14807 665 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 FAM43BQ6ZT52 329 aaPredicted RBP9.18□□□□□ -0.94
CCL28-201ENST00000361115 WNK4Q96J92 1243 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 ZBTB3Q9H5J0 574 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
CCL28-201ENST00000361115 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
CCL28-201ENST00000361115 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
CCL28-201ENST00000361115 CGNQ9P2M7 1197 aaKnown RBP9.17□□□□□ -0.94
CCL28-201ENST00000361115 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
CCL28-201ENST00000361115 RIOK3O14730 519 aaKnown RBP9.17□□□□□ -0.94
CCL28-201ENST00000361115 COPS6Q7L5N1 327 aa9.17□□□□□ -0.94
CCL28-201ENST00000361115 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
CCL28-201ENST00000361115 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 CLSTN1O94985 981 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ADCY5O95622 1261 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 TNNI2P48788 182 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 GTF2A2P52657 109 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 FOXD4L6Q3SYB3 417 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 FOXD4L3Q6VB84 417 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 ANKRD13AQ8IZ07 590 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 POLLQ9UGP5 575 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 MAST3O60307 1309 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 SMARCA5O60264 1052 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 ST18O60284 1047 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 DACT2Q5SW24 774 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 TTC22Q5TAA0 569 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ANGEL2Q5VTE6 544 aaKnown RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 ANKLE1Q8NAG6 615 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 OTUD7AQ8TE49 926 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 XAGE3Q8WTP9 111 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ZNF408Q9H9D4 720 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 CWC25Q9NXE8 425 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 UFL1O94874 794 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
CCL28-201ENST00000361115 GPTP24298 496 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 SOX10P56693 466 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ZNF333Q96JL9 665 aa9.16□□□□□ -0.94
CCL28-201ENST00000361115 ADM5C9JUS6 153 aa9.15□□□□□ -0.94
CCL28-201ENST00000361115 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.94
CCL28-201ENST00000361115 ZNF771Q7L3S4 317 aaPredicted RBP9.15□□□□□ -0.94
CCL28-201ENST00000361115 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
CCL28-201ENST00000361115 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.94
CCL28-201ENST00000361115 BRD1O95696 1058 aa9.15□□□□□ -0.95
CCL28-201ENST00000361115 BMP8BP34820 402 aa9.15□□□□□ -0.95
CCL28-201ENST00000361115 GNAI1P63096 354 aa9.15□□□□□ -0.95
CCL28-201ENST00000361115 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.95
CCL28-201ENST00000361115 OLFM4Q6UX06 510 aa9.15□□□□□ -0.95
CCL28-201ENST00000361115 PYCARDQ9ULZ3 195 aa9.15□□□□□ -0.95
CCL28-201ENST00000361115 IL16Q14005 1332 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 POLR2AP24928 1970 aaKnown RBP9.14□□□□□ -0.95
CCL28-201ENST00000361115 FAM193AP78312 1265 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 TMX3Q96JJ7 454 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 KCNF1Q9H3M0 494 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 MYL6BP14649 208 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 SDSP20132 328 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 SP3Q02447 781 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 UVSSAQ2YD98 709 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 SAMD7Q7Z3H4 446 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 SLC10A4Q96EP9 437 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 METTL22Q9BUU2 404 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms