RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 LAS1LQ9Y4W2 734 aaKnown RBP8.19□□□□□ -1.1
CCDC196-201ENST00000359454 PAPPA2Q9BXP8 1791 aa8.19□□□□□ -1.1
CCDC196-201ENST00000359454 COL4A1P02462 1669 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 NR1I2O75469 434 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 RALBP1Q15311 655 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 QPCTQ16769 361 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 Q3C1V9 767 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 CCDC152Q4G0S7 254 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 NOM1Q5C9Z4 860 aaKnown RBP8.18□□□□□ -1.1
CCDC196-201ENST00000359454 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 PODNQ7Z5L7 613 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
CCDC196-201ENST00000359454 GMLQ99445 158 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 XDHP47989 1333 aa8.18□□□□□ -1.1
CCDC196-201ENST00000359454 SCN9AQ15858 1988 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 UBE2Q2LH0YL09 131 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 PDE8AO60658 829 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 LILRB3O75022 631 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 TM4SF4P48230 202 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 COPS2P61201 443 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 DUSP27Q5VZP5 1158 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 RUNDC1Q96C34 613 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
CCDC196-201ENST00000359454 GPR25O00155 361 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-201ENST00000359454 NF2P35240 595 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 MMP14P50281 582 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 SREBF2Q12772 1141 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 MTMR2Q13614 643 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 FBXO46Q6PJ61 603 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-201ENST00000359454 MOB2Q70IA6 237 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 ANKRD18AQ8IVF6 992 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 CCDC146Q8IYE0 955 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
CCDC196-201ENST00000359454 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
CCDC196-201ENST00000359454 PDE4DIPQ5VU43 2346 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 PSME4Q14997 1843 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 MYO3BQ8WXR4 1341 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 FKTNO75072 461 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 RFC5P40937 340 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 NBPF9Q3BBW0 867 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 PRAMEF18Q5VWM3 479 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 PPP2R2DQ66LE6 453 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 ARMC9Q7Z3E5 817 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 SCUBE3Q8IX30 993 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 CDC5LQ99459 802 aaKnown RBP8.15□□□□□ -1.1
CCDC196-201ENST00000359454 MYD88Q99836 296 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 CFHR5Q9BXR6 569 aa8.15□□□□□ -1.1
CCDC196-201ENST00000359454 MED23Q9ULK4 1368 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 SPDYE5A6NIY4 337 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 WNT10BO00744 389 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 MMRN1Q13201 1228 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 DACT2Q5SW24 774 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 STRIP1Q5VSL9 837 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 SYMPKQ92797 1274 aaKnown RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 MTRQ99707 1265 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 METTL22Q9BUU2 404 aaPredicted RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 MBIPQ9NS73 344 aa8.14□□□□□ -1.11
CCDC196-201ENST00000359454 SCAF8Q9UPN6 1271 aaKnown RBP8.14□□□□□ -1.11
CCDC196-201ENST00000359454 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 NEFLP07196 543 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 ZNF853P0CG23 659 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 CTSWP56202 376 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 INHBEP58166 350 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 PTPN12Q05209 780 aaKnown RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 CALD1Q05682 793 aaKnown RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 APOBEC3FQ8IUX4 373 aaKnown RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 COA1Q9GZY4 146 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
CCDC196-201ENST00000359454 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
CCDC196-201ENST00000359454 MANSC4A6NHS7 340 aaPredicted RBP8.12□□□□□ -1.11
CCDC196-201ENST00000359454 SASH1O94885 1247 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
CCDC196-201ENST00000359454 GNAI1P63096 354 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 LDLRAD1Q5T700 205 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 ERICH6BQ5W0A0 696 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 SPRYD7Q5W111 196 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
CCDC196-201ENST00000359454 BRICD5Q6PL45 260 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
CCDC196-201ENST00000359454 TTLL11Q8NHH1 800 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms