RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 SEPT11Q9NVA2 429 aaKnown RBP12.79□□□□□ -0.36
TMC3-201ENST00000359440 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 E7EWF7 191 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 IKBKBO14920 756 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 NEFHP12036 1026 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 KRBA2Q6ZNG9 492 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 USP28Q96RU2 1077 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
TMC3-201ENST00000359440 CYP7A1P22680 504 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 GPTP24298 496 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 B4GALNT4Q76KP1 1039 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
TMC3-201ENST00000359440 SPTLC3Q9NUV7 552 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 GBP2P32456 591 aaPredicted RBP12.78□□□□□ -0.36
TMC3-201ENST00000359440 ATP2B2Q01814 1243 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 POSTNQ15063 836 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 DDX12PQ92771 950 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
TMC3-201ENST00000359440 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
TMC3-201ENST00000359440 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 WHAMMP3Q1A5X7 153 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 SARM1Q6SZW1 724 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 HAUS7Q99871 368 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 COPRSQ9NQ92 184 aa12.78□□□□□ -0.36
TMC3-201ENST00000359440 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.36
TMC3-201ENST00000359440 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 POLA2Q14181 598 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 KRT40Q6A162 431 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 LRRC59Q96AG4 307 aaKnown RBP12.77□□□□□ -0.36
TMC3-201ENST00000359440 KIF2CQ99661 725 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 STMN4Q9H169 189 aaPredicted RBP12.77□□□□□ -0.36
TMC3-201ENST00000359440 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.36
TMC3-201ENST00000359440 ZNF76P36508 570 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 GSTO1P78417 241 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.36
TMC3-201ENST00000359440 STX10O60499 249 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 PLCD1P51178 756 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.37
TMC3-201ENST00000359440 GPR108Q9NPR9 543 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.37
TMC3-201ENST00000359440 OTUD6BQ8N6M0 293 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
TMC3-201ENST00000359440 PHLPP2Q6ZVD8 1323 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 TAF5LO75529 589 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
TMC3-201ENST00000359440 TNNC1P63316 161 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 ASIC1P78348 528 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
TMC3-201ENST00000359440 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 ADCY9O60503 1353 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 GPAA1O43292 621 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
TMC3-201ENST00000359440 STX17P56962 302 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 DTHD1Q6ZMT9 781 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 TSC1Q92574 1164 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 TMEM2Q9UHN6 1383 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 PFKFB1P16118 471 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 MATR3P43243 847 aaKnown RBP eCLIP12.76□□□□□ -0.37
TMC3-201ENST00000359440 CEBPAP49715 358 aaPredicted RBP12.76□□□□□ -0.37
TMC3-201ENST00000359440 SPAG5Q96R06 1193 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 POLR3EQ9NVU0 708 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 RNF17Q9BXT8 1623 aaKnown RBP12.76□□□□□ -0.37
TMC3-201ENST00000359440 ERCC6LQ2NKX8 1250 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
TMC3-201ENST00000359440 KIAA1210Q9ULL0 1709 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 TIMM10P62072 90 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 C10orf67Q8IYJ2 551 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
TMC3-201ENST00000359440 BCCIPQ9P287 314 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMC3-201ENST00000359440 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
TMC3-201ENST00000359440 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 MICALL1Q8N3F8 863 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
TMC3-201ENST00000359440 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
TMC3-201ENST00000359440 ERMNQ8TAM6 284 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms