RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PSME4Q14997 1843 aa16.53■□□□□ 0.24
PDLIM5-203ENST00000359265 G3V3G9 751 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 IL1R1P14778 569 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 DCAF8Q5TAQ9 597 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 VPS33BQ9H267 617 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
PDLIM5-203ENST00000359265 LAMB1P07942 1786 aa16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 CYP7A1P22680 504 aa16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 KRT32Q14532 448 aa16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
PDLIM5-203ENST00000359265 RIMBP2O15034 1052 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 MBD4O95243 580 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 PSMA5P28066 241 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 NEK4P51957 841 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 TSGA10IPQ3SY00 556 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 CDK5RAP2Q96SN8 1893 aa16.5■□□□□ 0.23
PDLIM5-203ENST00000359265 BAZ2AQ9UIF9 1905 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 GNAT2P19087 354 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 KCNA4P22459 653 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 MCM2P49736 904 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 CASP8AP2Q9UKL3 1982 aa16.49■□□□□ 0.23
PDLIM5-203ENST00000359265 ZMYM6O95789 1325 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 FAM205AQ6ZU69 1335 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 PPIP5K2O43314 1243 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 CD2BP2O95400 341 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
PDLIM5-203ENST00000359265 MAGEB6P1A0A0J9YX57 407 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 PRDX5P30044 214 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 GSTO1P78417 241 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 MECOMQ03112 1051 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 IMMTQ16891 758 aaKnown RBP16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 CYP46A1Q9Y6A2 500 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
PDLIM5-203ENST00000359265 LTBP3Q9NS15 1303 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 FOXP2O15409 715 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 APPP05067 770 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 CYP21A2P08686 494 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 AOC3Q16853 763 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 BLOC1S2Q6QNY1 142 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 LCORLQ8N3X6 602 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 NACAP1Q9BZK3 213 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 ZSWIM6Q9HCJ5 1215 aa16.46■□□□□ 0.23
PDLIM5-203ENST00000359265 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 ECE2O60344 883 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 ALX1Q15699 326 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 ADGRA1Q86SQ6 560 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 MIGA1Q8NAN2 632 aa16.45■□□□□ 0.22
PDLIM5-203ENST00000359265 FGAP02671 866 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 LDHCP07864 332 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 PRPF38BQ5VTL8 546 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 SLF2Q8IX21 1173 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 TTC14Q96N46 770 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 NAPBQ9H115 298 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 DBNDD1Q9H9R9 158 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
PDLIM5-203ENST00000359265 ZNF213O14771 459 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 GTF2IP78347 998 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 NIM1KQ8IY84 436 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
PDLIM5-203ENST00000359265 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms