RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CTDSPL2Q05D32 466 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 ARHGEF25Q86VW2 580 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 UBAC1Q9BSL1 405 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PRDM11Q9NQV5 511 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 ADAMTS13Q76LX8 1427 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PTPRUQ92729 1446 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 BTBD18B2RXH4 712 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 FDPSP14324 419 aaKnown RBP7.52□□□□□ -1.2
CSDE1-203ENST00000358528 DHX8Q14562 1220 aaKnown RBP7.52□□□□□ -1.2
CSDE1-203ENST00000358528 NYAP1Q6ZVC0 841 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 MIGA1Q8NAN2 632 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 CCDC191Q8NCU4 936 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 NUP88Q99567 741 aaPredicted RBP7.52□□□□□ -1.2
CSDE1-203ENST00000358528 SERTAD1Q9UHV2 236 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 DENND2AQ9ULE3 1009 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 ANGEL1Q9UNK9 670 aaKnown RBP7.52□□□□□ -1.2
CSDE1-203ENST00000358528 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.2
CSDE1-203ENST00000358528 NPHP4O75161 1426 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 WDHD1O75717 1129 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 CMA1P23946 247 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 RBM43Q6ZSC3 357 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 ENGASEQ8NFI3 743 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 CABP5Q9NP86 173 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 CWC15Q9P013 229 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 LRP2BPQ9P2M1 347 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 PXDNLA1KZ92 1463 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 PSDA5PKW4 1024 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 PHKG2P15735 406 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 SMC1AQ14683 1233 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 DIS3L2Q8IYB7 885 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 KRI1Q8N9T8 703 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 APPBP2Q92624 585 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 IL17RAQ96F46 866 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 HINFPQ9BQA5 517 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 IRX2Q9BZI1 471 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 TRMT112Q9UI30 125 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 A0A1W2PQ27 194 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 A0A1W2PQ64 194 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 N4BP3O15049 544 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 IPO7O95373 1038 aaKnown RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 PDIA6Q15084 440 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 TSGA10IPQ3SY00 556 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 AXDND1Q5T1B0 1012 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-203ENST00000358528 NBPF11Q86T75 865 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 GOLGA1Q92805 767 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 GDAP1L1Q96MZ0 367 aa7.52□□□□□ -1.21
CSDE1-203ENST00000358528 CEMIPQ8WUJ3 1361 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 UBE2Q2LH0YL09 131 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 ARHGAP6O43182 974 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 ERLIN1O75477 346 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 ZFYP08048 801 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 CCDC175P0C221 793 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 XBP1P17861 261 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 CASP1P29466 404 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 HNRNPH2P55795 449 aaKnown RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SCARF1Q14162 830 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SMYD4Q8IYR2 804 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 COL15A1P39059 1388 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 EXOSC10Q01780 885 aaKnown RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SLC39A14Q15043 492 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 MFSD6Q6ZSS7 791 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SYNE4Q8N205 404 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 DCAF5Q96JK2 942 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 OSBPL5Q9H0X9 879 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SAMSN1Q9NSI8 373 aaKnown RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 POLR3EQ9NVU0 708 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 PEAK1Q9H792 1746 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 CAPN2P17655 700 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 RTN1Q16799 776 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
CSDE1-203ENST00000358528 NACAP1Q9BZK3 213 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 VPS16Q9H269 839 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 SH3TC1Q8TE82 1336 aa7.51□□□□□ -1.21
CSDE1-203ENST00000358528 EIF3JO75822 258 aaKnown RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 NAP1L1P55209 391 aaKnown RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 WTAPQ15007 396 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 POSTNQ15063 836 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 TOGARAM2Q6ZUX3 1019 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ILDR1Q86SU0 546 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 MAGEB6Q8N7X4 407 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 CAPZA3Q96KX2 299 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 WDR24Q96S15 920 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ALDH8A1Q9H2A2 487 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-203ENST00000358528 RABEP2Q9H5N1 569 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ARMT1Q9H993 441 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ZNF532Q9HCE3 1301 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 ANKRD18BA2A2Z9 1011 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 SNAP23O00161 211 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 MBD4O95243 580 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 DNA2P51530 1060 aa7.5□□□□□ -1.21
CSDE1-203ENST00000358528 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms