RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 TYW5A2RUC4 315 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 FASTKD5Q7L8L6 764 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 UBE3BQ7Z3V4 1068 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 CDAN1Q8IWY9 1227 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 TAB3Q8N5C8 712 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 EVI5LQ96CN4 794 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 MRPL46Q9H2W6 279 aaKnown RBP6.5□□□□□ -1.37
BRCA1-203ENST00000357654 STIM2Q9P246 746 aa6.5□□□□□ -1.37
BRCA1-203ENST00000357654 PTPN14Q15678 1187 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 DPP9Q86TI2 863 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 N4BP3O15049 544 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 MGEA5O60502 916 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 APOBRQ0VD83 1088 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 MVPQ14764 893 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ANO4Q32M45 955 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 THUMPD2Q9BTF0 503 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ANGPTL3Q9Y5C1 460 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 USP47Q96K76 1375 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 SUPT3HB4E1H0 165 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 F6X3S4 739 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 DPYSL4O14531 572 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 RNASE9P60153 205 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF830Q96NB3 372 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 LRRC2Q9BYS8 371 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ZSCAN16Q9H4T2 348 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 TXNDC9O14530 226 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 MAP3K7O43318 606 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ARHGEF10LQ9HCE6 1279 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 POGZQ7Z3K3 1410 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 JADE1Q6IE81 842 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 SND1Q7KZF4 910 aaKnown RBP eCLIP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 MCUQ8NE86 351 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 DDX17Q92841 729 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 NYXQ9GZU5 481 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 HACD3Q9P035 362 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 FHOD3Q2V2M9 1422 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 NVLO15381 856 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ANGPTL8Q6UXH0 198 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 RPS6KC1Q96S38 1066 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 PRKRIP1Q9H875 184 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-203ENST00000357654 ANO10Q9NW15 660 aa6.49□□□□□ -1.37
BRCA1-203ENST00000357654 SYCE3A1L190 88 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SMTNP53814 917 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 NCAPH2Q6IBW4 605 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 GABPB2Q8TAK5 448 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 UBLCP1Q8WVY7 318 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ZRANB1Q9UGI0 708 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 HSPA4P34932 840 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 CCDC94Q9BW85 323 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ANLNQ9NQW6 1124 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SMYD2Q9NRG4 433 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SAMSN1Q9NSI8 373 aaKnown RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 M0R2C6 588 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ATP1A2P50993 1020 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 KARSQ15046 597 aaKnown RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SEL1L2Q5TEA6 688 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF692Q9BU19 519 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 RAPGEF3O95398 923 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 FMNL1O95466 1100 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 LDHBP07195 334 aaKnown RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 NPR1P16066 1061 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TRAF1Q13077 416 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ERCC6LQ2NKX8 1250 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TTC31Q49AM3 519 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 HSP90AA5PQ58FG0 334 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SULF1Q8IWU6 871 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SMAP1Q8IYB5 467 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-203ENST00000357654 NME8Q8N427 588 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 HDAC11Q96DB2 347 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 FMN1Q68DA7 1419 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 AGRPO00253 132 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SPOPO43791 374 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ZNF131P52739 623 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 DHX58Q96C10 678 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 PGBD1Q96JS3 809 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ZKSCAN3Q9BRR0 538 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SH2D4AQ9H788 454 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 KRT81Q14533 505 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 SIX5Q8N196 739 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TSC1Q92574 1164 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 KIFAP3Q92845 792 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 GCC1Q96CN9 775 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TBC1D7Q9P0N9 293 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 ANAPC5Q9UJX4 755 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 CLCA2Q9UQC9 943 aa6.48□□□□□ -1.37
BRCA1-203ENST00000357654 TCP10L2B9ZVM9 353 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 PPIP5K2O43314 1243 aa6.47□□□□□ -1.37
BRCA1-203ENST00000357654 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms