RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 DESI2Q9BSY9 194 aa7.82□□□□□ -1.16
RTN4-203ENST00000357376 RNF41Q9H4P4 317 aaPredicted RBP7.82□□□□□ -1.16
RTN4-203ENST00000357376 LMAN1P49257 510 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 EIF5P55010 431 aaKnown RBP7.81□□□□□ -1.16
RTN4-203ENST00000357376 CATIPQ7Z7H3 387 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 CTCFLQ8NI51 663 aaPredicted RBP7.81□□□□□ -1.16
RTN4-203ENST00000357376 KRT23Q9C075 422 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 ARFGAP3Q9NP61 516 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 BTBD18B2RXH4 712 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 PRDM1O75626 825 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 KIF20AO95235 890 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 CMA1P23946 247 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 CCT6AP40227 531 aaKnown RBP7.81□□□□□ -1.16
RTN4-203ENST00000357376 PDIA6Q15084 440 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.81□□□□□ -1.163e-7■□□□□ 8.9
RTN4-203ENST00000357376 ANKARQ7Z5J8 1434 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 A0A1W2PQ27 194 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 A0A1W2PQ64 194 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 A0A1W2PQD8 194 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 GOLGA6L9A6NEM1 432 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 TRIM75PA6NK02 468 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 KIF23Q02241 960 aaPredicted RBP7.81□□□□□ -1.16
RTN4-203ENST00000357376 IQCB1Q15051 598 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 FBXO38Q6PIJ6 1188 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 TRIM34Q9BYJ4 488 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 PCDHA5Q9Y5H7 936 aa7.81□□□□□ -1.16
RTN4-203ENST00000357376 CCDC175P0C221 793 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 TCIRG1Q13488 830 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 AXDND1Q5T1B0 1012 aaPredicted RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 RRAGBQ5VZM2 374 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 KIAA1328Q86T90 577 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 NOC3LQ8WTT2 800 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 CNNM2Q9H8M5 875 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 ZNHIT6Q9NWK9 470 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 MAPK8IP1Q9UQF2 711 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SPATA31D1Q6ZQQ2 1576 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 RIMS1Q86UR5 1692 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 EIF3JO75822 258 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 DHX40Q8IX18 779 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 GRAMD1CQ8IYS0 662 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 FMR1NBQ8N0W7 255 aaPredicted RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 SYNE4Q8N205 404 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 GREM2Q9H772 168 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 INCENPQ9NQS7 918 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 POLR3EQ9NVU0 708 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 CWC15Q9P013 229 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 CUTAO60888 179 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 CTDNEP1O95476 244 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 RHOXF2BP0C7M4 288 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 PHKA1P46020 1223 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 STIM1Q13586 685 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 POSTNQ15063 836 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 ZNF174Q15697 407 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 ZNF569Q5MCW4 686 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 IFIT1BQ5T764 474 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 USPL1Q5W0Q7 1092 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SARM1Q6SZW1 724 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 DZIP3Q86Y13 1208 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 TMEM87BQ96K49 555 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 RHOXF2Q9BQY4 288 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 TEX13AQ9BXU3 409 aaPredicted RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 CALCOCO1Q9P1Z2 691 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 VWA3AA6NCI4 1184 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 PHACTR2O75167 634 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SCARF1Q14162 830 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SLC39A14Q15043 492 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 TAF3Q5VWG9 929 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 APOA5Q6Q788 366 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 NUTM2AQ8IVF1 878 aaPredicted RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 ESR2Q92731 530 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 KCNB2Q92953 911 aa7.8□□□□□ -1.16
RTN4-203ENST00000357376 SRRTQ9BXP5 876 aaKnown RBP7.8□□□□□ -1.16
RTN4-203ENST00000357376 COBLO75128 1261 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 PDE6AP16499 860 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 GABPB1Q06547 395 aaPredicted RBP7.79□□□□□ -1.16
RTN4-203ENST00000357376 LONRF3Q496Y0 759 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 DEF6Q9H4E7 631 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 JAG2Q9Y219 1238 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 DLG5Q8TDM6 1919 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 ZMYM6O95789 1325 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 DIP2AQ14689 1571 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 H7C1W4 665 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 SNAP23O00161 211 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 ARHGAP6O43182 974 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
RTN4-203ENST00000357376 CAVIN4Q5BKX8 364 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 IGSF22Q8N9C0 903 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 GOLGA1Q92805 767 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 TIGD1Q96MW7 591 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 RUFY1Q96T51 708 aa7.79□□□□□ -1.16
RTN4-203ENST00000357376 PLIN2Q99541 437 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms