RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 ATL3Q6DD88 541 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 UBR1Q8IWV7 1749 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 SH3TC1Q8TE82 1336 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 DENND2AQ9ULE3 1009 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 SUFUQ9UMX1 484 aa9.46□□□□□ -0.9
CDC42SE1-201ENST00000357235 FGAP02671 866 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 TATP17735 454 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 PLEKHG2Q9H7P9 1386 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 JCADQ9P266 1359 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZNF213O14771 459 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CABP4P57796 275 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 GNG11P61952 73 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 TRDNQ13061 729 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 OLFM4Q6UX06 510 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 NFXL1Q6ZNB6 911 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 ALG1Q9BT22 464 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZCCHC17Q9NP64 241 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 FANCLQ9NW38 375 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 MROH7-TTC4A0A0A0MT08 1334 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 SALL1Q9NSC2 1324 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 A0A1W2PQ27 194 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 A0A1W2PQ64 194 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 A0A1W2PQD8 194 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 ADORA1P30542 326 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC158Q5M9N0 1113 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
CDC42SE1-201ENST00000357235 ANKARQ7Z5J8 1434 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 CRYBG1Q9Y4K1 1723 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 YEATS4O95619 227 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 ATP6V1AP38606 617 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 LMAN1P49257 510 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 ADKP55263 362 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 EVCP57679 992 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 NCAPHQ15003 741 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 TMED8Q6PL24 325 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 VPS37DQ86XT2 251 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 PPM1EQ8WY54 764 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 MED4Q9NPJ6 270 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 UBE2Q2LH0YL09 131 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 IVLP07476 585 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 OAS2P29728 719 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 MAP2K2P36507 400 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 IL15P40933 162 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 MYL5Q02045 173 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 KARSQ15046 597 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZNF827Q17R98 1081 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 PUS7LQ9H0K6 701 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 L2HGDHQ9H9P8 463 aa9.44□□□□□ -0.9
CDC42SE1-201ENST00000357235 FOXN1O15353 648 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZRANB2O95218 330 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 A1BGP04217 495 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 PHKG2P15735 406 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 ACTN2P35609 894 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 GSCP56915 257 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCDC57Q2TAC2 916 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 MCTP2Q6DN12 878 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 ANKRD20A12PQ8NF67 263 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 HEG1Q9ULI3 1381 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 IDH1O75874 414 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 CMA1P23946 247 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 ZAP70P43403 619 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 TRIM29Q14134 588 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 SCARF1Q14162 830 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 BRAPQ7Z569 592 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
CDC42SE1-201ENST00000357235 EYA2O00167 538 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 FOXO4P98177 505 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 LONRF3Q496Y0 759 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 PLBD2Q8NHP8 589 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 EXOC4Q96A65 974 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 NCAPD2Q15021 1401 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 GPAA1O43292 621 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 CCP110O43303 1012 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 CBFA2T2O43439 604 aa9.42□□□□□ -0.9
CDC42SE1-201ENST00000357235 SMC1AQ14683 1233 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms