RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 PLVAPQ9BX97 442 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 CNNM2Q9H8M5 875 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 TMTC2Q8N394 836 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 RNF216Q9NWF9 866 aaPredicted RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 FAN1Q9Y2M0 1017 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 NUTM2FA1L443 756 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 RILPL1Q5EBL4 403 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 NUTM2GQ5VZR2 741 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 ISM2Q6H9L7 571 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 SUGP1Q8IWZ8 645 aaKnown RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 RETREG2Q8NC44 543 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 CABP2Q9NPB3 220 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 NAP1L1P55209 391 aaKnown RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 AEBP2Q6ZN18 517 aaPredicted RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 CAPS2Q9BXY5 557 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 RTL9Q8NET4 1388 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 SLIT1O75093 1534 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 SPATA31D1Q6ZQQ2 1576 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 TRIM37O94972 964 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 OTUD7AQ8TE49 926 aaPredicted RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 BICC1Q9H694 974 aaKnown RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 STK26Q9P289 416 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 DBF4Q9UBU7 674 aaPredicted RBP7.41□□□□□ -1.22
TRIM38-201ENST00000357085 BIN1O00499 593 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 C6orf163Q5TEZ5 329 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
TRIM38-201ENST00000357085 MYH6P13533 1939 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 RPS6KB1P23443 525 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 TSHZ3Q63HK5 1081 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 HAUS4Q9H6D7 363 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 TRIM35Q9UPQ4 493 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 ABCC3O15438 1527 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 OVOS2A0A0G2JMS6 1433 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 CUTAO60888 179 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 SRGAP1Q7Z6B7 1085 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 NEK1Q96PY6 1258 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 ITGB1BP2Q9UKP3 347 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 GYS2P54840 703 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 MAP2K1Q02750 393 aaPredicted RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 CCDC170Q8IYT3 715 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 BRF1Q92994 677 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 FAM210AQ96ND0 272 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 HDAC9Q9UKV0 1011 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 SPG7Q9UQ90 795 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 PPP1R12BO60237 982 aaPredicted RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 RNF40O75150 1001 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 LARP1Q6PKG0 1096 aaKnown RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 NBPF5PQ86XG9 351 aaPredicted RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 XPO4Q9C0E2 1151 aaKnown RBP7.4□□□□□ -1.22
TRIM38-201ENST00000357085 CDC23Q9UJX2 597 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 MYO5BQ9ULV0 1848 aa7.4□□□□□ -1.22
TRIM38-201ENST00000357085 NOP2P46087 812 aaKnown RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 C16orf71Q8IYS4 520 aaPredicted RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 TRIM58Q8NG06 486 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 PARD6BQ9BYG5 372 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 MAP3K9P80192 1104 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 PLEKHO1Q53GL0 409 aaPredicted RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 GKAP1Q5VSY0 366 aaPredicted RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 TCP11Q8WWU5 503 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 CHUKO15111 745 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.23
TRIM38-201ENST00000357085 ALDH3A1P30838 453 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 ATP11AP98196 1134 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 NNTQ13423 1086 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 NBPF20Q3BBV1 942 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 WHAMMQ8TF30 809 aa7.4□□□□□ -1.23
TRIM38-201ENST00000357085 AMPD3Q01432 767 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC178Q5BJE1 867 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ARHGEF25Q86VW2 580 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 PLEKHF1Q96S99 279 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CDK19Q9BWU1 502 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 MTMR6Q9Y217 621 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC61Q9Y6R9 512 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 SYNRGQ9UMZ2 1314 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 COL3A1P02461 1466 aaPredicted RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ANO9A1A5B4 782 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 TADA3O75528 432 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 EPHB4P54760 987 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 FANCCQ00597 558 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CCDC152Q4G0S7 254 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 SPECC1Q5M775 1068 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
TRIM38-201ENST00000357085 RAB34Q9BZG1 259 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 LZTFL1Q9NQ48 299 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 HELLSQ9NRZ9 838 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 ADGRB1O14514 1584 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 GOLGA8BA8MQT2 603 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 CHL1O00533 1208 aa7.39□□□□□ -1.23
TRIM38-201ENST00000357085 GCFC2P16383 781 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms